RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 WWC2Q6AWC2 1192 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NLRP10Q86W26 655 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 TMEM87AQ8NBN3 555 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 TGFBRAP1Q8WUH2 860 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 ALS2CR12Q96Q35 445 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 GOPCQ9HD26 462 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 OVOS2A0A0J9YW53 1432 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 OVOS2Q6IE36 1432 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CAPN2P17655 700 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 SLC39A14Q15043 492 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CSGALNACT2Q8N6G5 542 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 FEZ1Q99689 392 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 C6orf50Q9HD87 102 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 TMOD2Q9NZR1 351 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 TBC1D7Q9P0N9 293 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CALCOCO1Q9P1Z2 691 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 SAMM50Q9Y512 469 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NRKQ7Z2Y5 1582 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 MROH5Q6ZUA9 1318 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 NRXN1Q9ULB1 1477 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 KRT86O43790 486 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 UFL1O94874 794 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 ADD2P35612 726 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 PARP10Q53GL7 1025 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 SRRTQ9BXP5 876 aaKnown RBP8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 IMPACTQ9P2X3 320 aa8.36□□□□□ -1.07
NEUROD4-201ENST00000242994 CD163L1Q9NR16 1453 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 H7C1W4 665 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 PPP1R12BO60237 982 aaPredicted RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 FGFR1OPO95684 399 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 ETF1P62495 437 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 PAK1Q13153 545 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 RASGRF1Q13972 1273 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 FAM114A1Q8IWE2 563 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 RRP36Q96EU6 259 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 PYM1Q9BRP8 204 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 USP27XA6NNY8 438 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 HLA-DOAP06340 250 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 PTGDRQ13258 359 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 MAATS1Q7Z4T9 603 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 ZC3H12CQ9C0D7 883 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 CSRNP2Q9H175 543 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 RSPH14Q9UHP6 348 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 WDR17Q8IZU2 1322 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 INF2Q27J81 1249 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 ZNF804AQ7Z570 1209 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 SLF2Q8IX21 1173 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 TXLNBQ8N3L3 684 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 NOC4LQ9BVI4 516 aaKnown RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 PCDHB6Q9Y5E3 794 aa8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
NEUROD4-201ENST00000242994 RPS8P62241 208 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 PLS1Q14651 629 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 UBE3CQ15386 1083 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 PTPROQ16827 1216 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SYMPKQ92797 1274 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 RBM28Q9NW13 759 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 FBXO3Q9UK99 471 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 TRAF5O00463 557 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 ERLIN2O94905 339 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 PARP1P09874 1014 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SIK1P57059 783 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SMIM5Q71RC9 77 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 VPS36Q86VN1 386 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SMAP1Q8IYB5 467 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 CNBD1Q8NA66 436 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 NELFBQ8WX92 580 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 FAM207AQ9NSI2 230 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 PPP2R2CQ9Y2T4 447 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 COL3A1P02461 1466 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 ANKARQ7Z5J8 1434 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 A0A1W2PQ27 194 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 A0A1W2PQ64 194 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 A0A1W2PQD8 194 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 UBAP1LF5GYI3 381 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 GNA11P29992 359 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 GSTO1P78417 241 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 SYCP3Q8IZU3 236 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 CEP112Q8N8E3 955 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 EPSTI1Q96J88 318 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 TIGD1Q96MW7 591 aa8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
NEUROD4-201ENST00000242994 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.08
NEUROD4-201ENST00000242994 CIAO1O76071 339 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms