RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 USP17L5A8MUK1 530 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 ZFYP08048 801 aaPredicted RBP20.2■□□□□ 0.82
CLTA-201ENST00000242285 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
CLTA-201ENST00000242285 LRRFIP1Q32MZ4 808 aaKnown RBP20.2■□□□□ 0.82
CLTA-201ENST00000242285 TATDN1Q6P1N9 297 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 LCORLQ8N3X6 602 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 PI4K2BQ8TCG2 481 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 WDR18Q9BV38 432 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
CLTA-201ENST00000242285 AS3MTQ9HBK9 375 aa20.2■□□□□ 0.82
CLTA-201ENST00000242285 BRCA2P51587 3418 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 PDHXO00330 501 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 MX1P20591 662 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 GPAT2Q6NUI2 795 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 SMC5Q8IY18 1101 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 PROCA1Q8NCQ7 364 aaPredicted RBP20.19■□□□□ 0.82
CLTA-201ENST00000242285 ZNF280CQ8ND82 737 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 DCP1AQ9NPI6 582 aaPredicted RBP20.19■□□□□ 0.82
CLTA-201ENST00000242285 SUPT16HQ9Y5B9 1047 aaKnown RBP20.19■□□□□ 0.82
CLTA-201ENST00000242285 ADGRA2Q96PE1 1338 aa20.19■□□□□ 0.82
CLTA-201ENST00000242285 MKI67P46013 3256 aaKnown RBP20.18■□□□□ 0.82
CLTA-201ENST00000242285 MBD4O95243 580 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 GABPAQ06546 454 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 SH3D19Q5HYK7 790 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 ANKRD45Q5TZF3 282 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 PARK7Q99497 189 aaKnown RBP20.18■□□□□ 0.82
CLTA-201ENST00000242285 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 ZSWIM8A7E2V4 1837 aa20.18■□□□□ 0.82
CLTA-201ENST00000242285 HOXD10P28358 340 aa20.17■□□□□ 0.82
CLTA-201ENST00000242285 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
CLTA-201ENST00000242285 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
CLTA-201ENST00000242285 MCM9Q9NXL9 1143 aa20.17■□□□□ 0.82
CLTA-201ENST00000242285 ZBTB21Q9ULJ3 1066 aa20.17■□□□□ 0.82
CLTA-201ENST00000242285 TRIM75PA6NK02 468 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 POLR3DP05423 398 aaPredicted RBP20.16■□□□□ 0.82
CLTA-201ENST00000242285 SPP2Q13103 211 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 TICAM2Q86XR7 235 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 SDR42E1Q8WUS8 393 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 APPBP2Q92624 585 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.16■□□□□ 0.82
CLTA-201ENST00000242285 AGTPBP1Q9UPW5 1226 aa20.16■□□□□ 0.82
CLTA-201ENST00000242285 C19orf81C9J6K1 198 aa20.15■□□□□ 0.82
CLTA-201ENST00000242285 RNF113AO15541 343 aaKnown RBP20.15■□□□□ 0.82
CLTA-201ENST00000242285 EN2P19622 333 aaPredicted RBP20.15■□□□□ 0.82
CLTA-201ENST00000242285 PLCD1P51178 756 aa20.15■□□□□ 0.82
CLTA-201ENST00000242285 OTUD7AQ8TE49 926 aaPredicted RBP20.15■□□□□ 0.82
CLTA-201ENST00000242285 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
CLTA-201ENST00000242285 SRRDQ9UH36 339 aa20.15■□□□□ 0.82
CLTA-201ENST00000242285 GREB1LQ9C091 1923 aaPredicted RBP20.15■□□□□ 0.82
CLTA-201ENST00000242285 SHMT1P34896 483 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 BACE1P56817 501 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 SLFNL1Q499Z3 407 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 GADL1Q6ZQY3 521 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
CLTA-201ENST00000242285 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 ARHGAP39Q9C0H5 1083 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 SWAP70Q9UH65 585 aa20.14■□□□□ 0.81
CLTA-201ENST00000242285 GDF11O95390 407 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 PDE1AP54750 535 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 JAG1P78504 1218 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■■■■□ 20.2
CLTA-201ENST00000242285 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 CERKLQ49MI3 558 aaPredicted RBP20.13■□□□□ 0.81
CLTA-201ENST00000242285 AMOTL1Q8IY63 956 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 STRBPQ96SI9 672 aaKnown RBP20.13■□□□□ 0.81
CLTA-201ENST00000242285 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
CLTA-201ENST00000242285 PRKAB2O43741 272 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 CHGBP05060 677 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 BCRP11274 1271 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 PSMC4P43686 418 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 HMGCS2P54868 508 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 C12orf60Q5U649 245 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 NKX2-3Q8TAU0 364 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 OSBP2Q969R2 916 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
CLTA-201ENST00000242285 USP17L10C9JJH3 530 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 GH2P01242 217 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 CAPN2P17655 700 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 GNAT2P19087 354 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 ABCB5Q2M3G0 1257 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 CABP5Q9NP86 173 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
CLTA-201ENST00000242285 MYH4Q9Y623 1939 aa20.11■□□□□ 0.81
CLTA-201ENST00000242285 IGHDP01880 384 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 OSBPP22059 807 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 HOXA7P31268 230 aaPredicted RBP20.1■□□□□ 0.81
CLTA-201ENST00000242285 TREML2Q5T2D2 321 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 EVI5LQ96CN4 794 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 PARP14Q460N5 1801 aa20.1■□□□□ 0.81
CLTA-201ENST00000242285 USP17L12C9JPN9 530 aa20.09■□□□□ 0.81
CLTA-201ENST00000242285 USP17L21D6R901 530 aa20.09■□□□□ 0.81
CLTA-201ENST00000242285 GPAA1O43292 621 aa20.09■□□□□ 0.81
CLTA-201ENST00000242285 FMNL1O95466 1100 aaPredicted RBP20.09■□□□□ 0.81
CLTA-201ENST00000242285 CYP2C8P10632 490 aa20.09■□□□□ 0.81
CLTA-201ENST00000242285 FCGRTP55899 365 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms