RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 RBL2Q08999 1139 aa12.39□□□□□ -0.43
CCDC170-201ENST00000239374 APOA5Q6Q788 366 aa12.39□□□□□ -0.43
CCDC170-201ENST00000239374 TTLL7Q6ZT98 887 aa12.39□□□□□ -0.43
CCDC170-201ENST00000239374 CSGALNACT2Q8N6G5 542 aa12.39□□□□□ -0.43
CCDC170-201ENST00000239374 FAM71BQ8TC56 605 aa12.39□□□□□ -0.43
CCDC170-201ENST00000239374 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 CALM1P0DP23 149 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 CALM2P0DP24 149 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 CALM3P0DP25 149 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 ADORA1P30542 326 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
CCDC170-201ENST00000239374 OR8K1Q8NGG5 319 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SMARCC2Q8TAQ2 1214 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 MAN1B1Q9UKM7 699 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 C8orf74Q6P047 294 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 ENC1O14682 589 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 RNASE9P60153 205 aaKnown RBP12.38□□□□□ -0.43
CCDC170-201ENST00000239374 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
CCDC170-201ENST00000239374 MED4Q9NPJ6 270 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 NEO1Q92859 1461 aa12.38□□□□□ -0.43
CCDC170-201ENST00000239374 CHGBP05060 677 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 TOGARAM2Q6ZUX3 1019 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 TICAM2Q86XR7 235 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 MYO1CO00159 1063 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 HPDP32754 393 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 NF2P35240 595 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 CCDC114Q96M63 670 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 SPTY2D1Q68D10 685 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ACRBPQ8NEB7 543 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 CCDC91Q7Z6B0 441 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 PLEKHA4Q9H4M7 779 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ZNF287Q9HBT7 754 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ABCB6Q9NP58 842 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
CCDC170-201ENST00000239374 ARAP3Q8WWN8 1544 aa12.37□□□□□ -0.43
CCDC170-201ENST00000239374 KCNJ18B7U540 433 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ANKRD65E5RJM6 399 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ZMYND10O75800 440 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 LIG3P49916 1009 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 KCNJ12Q14500 433 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ENOX1Q8TC92 643 aaKnown RBP12.36□□□□□ -0.43
CCDC170-201ENST00000239374 TSGA10Q9BZW7 698 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 PTPRMP28827 1452 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 PPRC1Q5VV67 1664 aaKnown RBP12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ARHGAP31Q2M1Z3 1444 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ERCC3P19447 782 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 TSGA10IPQ3SY00 556 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
CCDC170-201ENST00000239374 USP42Q9H9J4 1324 aaKnown RBP12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ERCC5P28715 1186 aaPredicted RBP12.36□□□□□ -0.43
CCDC170-201ENST00000239374 PDE4DQ08499 809 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 MORC3Q14149 939 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ZNF654Q8IZM8 581 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 EEF2KMTQ96G04 330 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 CSRNP2Q9H175 543 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ALKQ9UM73 1620 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 NRXN1Q9ULB1 1477 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 GBP6Q6ZN66 633 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 BCAS4Q8TDM0 211 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 DPF2Q92785 391 aa12.36□□□□□ -0.43
CCDC170-201ENST00000239374 ADGRB1O14514 1584 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 TADA3O75528 432 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 BPIFA3Q9BQP9 254 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 HAUS4Q9H6D7 363 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
CCDC170-201ENST00000239374 PDE6AP16499 860 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 CYP2C19P33261 490 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 GNGT1P63211 74 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 CASP8Q14790 479 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 WDR24Q96S15 920 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
CCDC170-201ENST00000239374 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 RNF40O75150 1001 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 NEFHP12036 1026 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 NAPAP54920 295 aa12.35□□□□□ -0.43
CCDC170-201ENST00000239374 NR5A1Q13285 461 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms