RNA–Protein interactions for RNA: ENST00000236850.4

APOA1-201, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOA1, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-201ENST00000236850 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
APOA1-201ENST00000236850 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
APOA1-201ENST00000236850 DCP1AQ9NPI6 582 aaPredicted RBP18.53■□□□□ 0.56
APOA1-201ENST00000236850 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
APOA1-201ENST00000236850 TRIM17Q9Y577 477 aa18.53■□□□□ 0.56
APOA1-201ENST00000236850 RNF113AO15541 343 aaKnown RBP18.52■□□□□ 0.56
APOA1-201ENST00000236850 SLC34A2O95436 690 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 SLC4A8Q2Y0W8 1093 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 TSHZ3Q63HK5 1081 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 SDR42E1Q8WUS8 393 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 APPBP2Q92624 585 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 CABP5Q9NP86 173 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 ZBTB21Q9ULJ3 1066 aa18.52■□□□□ 0.56
APOA1-201ENST00000236850 C19orf81C9J6K1 198 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 GNRH1P01148 92 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 RRP1BQ14684 758 aaKnown RBP18.51■□□□□ 0.55
APOA1-201ENST00000236850 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
APOA1-201ENST00000236850 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 OTOP1Q7RTM1 612 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 PI4K2BQ8TCG2 481 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 CD99L2Q8TCZ2 262 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 SWAP70Q9UH65 585 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 AGTPBP1Q9UPW5 1226 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
APOA1-201ENST00000236850 GDF11O95390 407 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 GNAT2P19087 354 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 PLCD1P51178 756 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 BACE1P56817 501 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 SH3D19Q5HYK7 790 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 C17orf99Q6UX52 265 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 PUS7LQ9H0K6 701 aaKnown RBP18.5■□□□□ 0.55
APOA1-201ENST00000236850 TMOD4Q9NZQ9 345 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 STAP2Q9UGK3 403 aa18.5■□□□□ 0.55
APOA1-201ENST00000236850 BAZ2AQ9UIF9 1905 aaKnown RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 GH2P01242 217 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 ABCB5Q2M3G0 1257 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 GIMAP6Q6P9H5 292 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 CCDC84Q86UT8 332 aaPredicted RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 TICAM2Q86XR7 235 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 OTUD7AQ8TE49 926 aaPredicted RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 SMCR8Q8TEV9 937 aaPredicted RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 FSD1Q9BTV5 496 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 MYH8P13535 1937 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 DDX60LQ5H9U9 1706 aaKnown RBP18.49■□□□□ 0.55
APOA1-201ENST00000236850 SALL3Q9BXA9 1300 aa18.49■□□□□ 0.55
APOA1-201ENST00000236850 PRKAB2O43741 272 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 OSBPP22059 807 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 PDE1AP54750 535 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 HMGCS2P54868 508 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 LACTBP83111 547 aaPredicted RBP18.48■□□□□ 0.55
APOA1-201ENST00000236850 GABPAQ06546 454 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 SLFNL1Q499Z3 407 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
APOA1-201ENST00000236850 HPS5Q9UPZ3 1129 aa18.48■□□□□ 0.55
APOA1-201ENST00000236850 HOXD10P28358 340 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 SHMT1P34896 483 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 USP14P54578 494 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 PRMT2P55345 433 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 NUCB1Q02818 461 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 MTMR2Q13614 643 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 C12orf60Q5U649 245 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 LNPKQ9C0E8 428 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 ARPP21Q9UBL0 812 aaPredicted RBP18.47■□□□□ 0.55
APOA1-201ENST00000236850 CPA4Q9UI42 421 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 PTPN22Q9Y2R2 807 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
APOA1-201ENST00000236850 LOC285556D6RIA3 1793 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 USP17L12C9JPN9 530 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 USP17L21D6R901 530 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 CYP2C8P10632 490 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 GCLCP48506 637 aaPredicted RBP18.46■□□□□ 0.55
APOA1-201ENST00000236850 RAB3GAP1Q15042 981 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 OSBP2Q969R2 916 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 CCDC17Q96LX7 622 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 FEZ1Q99689 392 aa18.46■□□□□ 0.55
APOA1-201ENST00000236850 GPAA1O43292 621 aa18.45■□□□□ 0.54
APOA1-201ENST00000236850 BCRP11274 1271 aa18.45■□□□□ 0.54
APOA1-201ENST00000236850 JAG1P78504 1218 aa18.45■□□□□ 0.54
APOA1-201ENST00000236850 SKAP1Q86WV1 359 aa18.45■□□□□ 0.54
APOA1-201ENST00000236850 NACAP1Q9BZK3 213 aa18.45■□□□□ 0.54
APOA1-201ENST00000236850 MPHOSPH10O00566 681 aaKnown RBP18.44■□□□□ 0.54
APOA1-201ENST00000236850 CHGBP05060 677 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
APOA1-201ENST00000236850 PSMC4P43686 418 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 SOX10P56693 466 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 IRX3P78415 501 aaPredicted RBP18.44■□□□□ 0.54
APOA1-201ENST00000236850 SBK1Q52WX2 424 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 TMEM179Q6ZVK1 233 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 ZNF287Q9HBT7 754 aa18.44■□□□□ 0.54
APOA1-201ENST00000236850 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
APOA1-201ENST00000236850 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
APOA1-201ENST00000236850 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
APOA1-201ENST00000236850 APPP05067 770 aa18.43■□□□□ 0.54
APOA1-201ENST00000236850 CYP2D6P10635 497 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms