RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 STAG1Q8WVM7 1258 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 NAPBQ9H115 298 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 ATP8A2Q9NTI2 1148 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 TAF6LQ9Y6J9 622 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 CENPFP49454 3210 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 PRC1O43663 620 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 CDKL5O76039 1030 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 CHGBP05060 677 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 LDHCP07864 332 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 FGRP09769 529 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 KRT85P78386 507 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 GSTO1P78417 241 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 ST3GAL1Q11201 340 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 SCRN1Q12765 414 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
CDCA3-201ENST00000229265 AKNAD1Q5T1N1 836 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 ZNF804AQ7Z570 1209 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 NECAB1Q8N987 351 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 HHIPL1Q96JK4 782 aa12.47□□□□□ -0.41
CDCA3-201ENST00000229265 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
CDCA3-201ENST00000229265 ANGEL1Q9UNK9 670 aaKnown RBP12.47□□□□□ -0.41
CDCA3-201ENST00000229265 TNRC18O15417 2968 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 MAGEB6P1A0A0J9YX57 407 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 CYP7A1P22680 504 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 PRDX5P30044 214 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 CTCFP49711 727 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 ZNF157P51786 506 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 DIXDC1Q155Q3 683 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 SYNE3Q6ZMZ3 975 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 ZFPM1Q8IX07 1006 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 NSUN7Q8NE18 718 aaKnown RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 DEFB129Q9H1M3 183 aa12.46□□□□□ -0.41
CDCA3-201ENST00000229265 ZNF70Q9UC06 446 aaPredicted RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 TTF2Q9UNY4 1162 aaKnown RBP12.46□□□□□ -0.41
CDCA3-201ENST00000229265 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.42
CDCA3-201ENST00000229265 H3BQV1 296 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 CRKP46108 304 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 PPP4CP60510 307 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 DLGAP5Q15398 846 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 LDLRAD1Q5T700 205 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
CDCA3-201ENST00000229265 SLF2Q8IX21 1173 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 IGDCC4Q8TDY8 1250 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
CDCA3-201ENST00000229265 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 RAI14Q9P0K7 980 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 SUGT1Q9Y2Z0 365 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
CDCA3-201ENST00000229265 BRCA2P51587 3418 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 MYO3BQ8WXR4 1341 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 TCP10L2B9ZVM9 353 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 USP2O75604 605 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 MBD4O95243 580 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 SLC3A2P08195 630 aaKnown RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 MAP2K2P36507 400 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 FKBP1AP62942 108 aaKnown RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 APOBRQ0VD83 1088 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 RASA3Q14644 834 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 C2orf69Q8N8R5 385 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 WASF1Q92558 559 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 NSUN4Q96CB9 384 aaKnown RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 ZNF396Q96N95 335 aaPredicted RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 LARP6Q9BRS8 491 aaKnown RBP12.44□□□□□ -0.42
CDCA3-201ENST00000229265 GRPEL1Q9HAV7 217 aa12.44□□□□□ -0.42
CDCA3-201ENST00000229265 MYH2Q9UKX2 1941 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ERICH2A1L162 156 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 TRPA1O75762 1119 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 BAG3O95817 575 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ECE1P42892 770 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 TDO2P48775 406 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 NFIAQ12857 509 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ZSCAN23Q3MJ62 389 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 LRSAM1Q6UWE0 723 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ESR2Q92731 530 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
CDCA3-201ENST00000229265 VEZTQ9HBM0 779 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 ABCF2Q9UG63 623 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 NID2Q14112 1375 aa12.43□□□□□ -0.42
CDCA3-201ENST00000229265 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 VPS37CA5D8V6 355 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-201ENST00000229265 SH2B2O14492 632 aaPredicted RBP12.42□□□□□ -0.42
CDCA3-201ENST00000229265 CPLX1O14810 134 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 CALM1P0DP23 149 aa12.42□□□□□ -0.42
CDCA3-201ENST00000229265 CALM2P0DP24 149 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms