RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KIF5CO60282 957 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
SF1-201ENST00000227503 USP5P45974 858 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 STX17P56962 302 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 GRIN1Q05586 938 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 NCOA7Q8NI08 942 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 RIC1Q4ADV7 1423 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 GPAA1O43292 621 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 IL2RBP14784 551 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 IBSPP21815 317 aaPredicted RBP16.01■□□□□ 0.15
SF1-201ENST00000227503 RBL2Q08999 1139 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
SF1-201ENST00000227503 KLHL10Q6JEL2 608 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 POLD4Q9HCU8 107 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 MKRN1Q9UHC7 482 aaKnown RBP16.01■□□□□ 0.15
SF1-201ENST00000227503 TFR2Q9UP52 801 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 SHANK3Q9BYB0 1731 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 WDR19Q8NEZ3 1342 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 CPLX1O14810 134 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 PPFIA4O75335 1185 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 MNAT1P51948 309 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 MMS22LQ6ZRQ5 1243 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 IGSF22Q8N9C0 903 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 NBPF3Q9H094 633 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 SEC31BQ9NQW1 1179 aa16.01■□□□□ 0.15
SF1-201ENST00000227503 EXOC5O00471 708 aa16■□□□□ 0.15
SF1-201ENST00000227503 APPP05067 770 aa16■□□□□ 0.15
SF1-201ENST00000227503 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
SF1-201ENST00000227503 MCTP2Q6DN12 878 aa16■□□□□ 0.15
SF1-201ENST00000227503 CEP112Q8N8E3 955 aa16■□□□□ 0.15
SF1-201ENST00000227503 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
SF1-201ENST00000227503 FAM212AQ96EL1 285 aa16■□□□□ 0.15
SF1-201ENST00000227503 RAI14Q9P0K7 980 aa16■□□□□ 0.15
SF1-201ENST00000227503 ENC1O14682 589 aa16■□□□□ 0.15
SF1-201ENST00000227503 ZNF213O14771 459 aa16■□□□□ 0.15
SF1-201ENST00000227503 HSPA2P54652 639 aa16■□□□□ 0.15
SF1-201ENST00000227503 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
SF1-201ENST00000227503 NKX2-3Q8TAU0 364 aa16■□□□□ 0.15
SF1-201ENST00000227503 CARD10Q9BWT7 1032 aa16■□□□□ 0.15
SF1-201ENST00000227503 HDAC6Q9UBN7 1215 aa16■□□□□ 0.15
SF1-201ENST00000227503 TRIM10Q9UDY6 481 aa16■□□□□ 0.15
SF1-201ENST00000227503 RIPOR2Q9Y4F9 1068 aa16■□□□□ 0.15
SF1-201ENST00000227503 CASP1P29466 404 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 MCAMP43121 646 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 SLC39A14Q15043 492 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
SF1-201ENST00000227503 PHKBQ93100 1093 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CXorf56Q9H5V9 222 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
SF1-201ENST00000227503 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CTAGE9A4FU28 777 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CDC25AP30304 524 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 MAN1B1Q9UKM7 699 aa15.99■□□□□ 0.15
SF1-201ENST00000227503 AKR1B15C9JRZ8 316 aaPredicted RBP15.98■□□□□ 0.15
SF1-201ENST00000227503 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 SLC9C2Q5TAH2 1124 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 VPS37DQ86XT2 251 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 HPSEQ9Y251 543 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 SAMM50Q9Y512 469 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 C4AP0C0L4 1744 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 C4BP0C0L5 1744 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 ERLIN2O94905 339 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 KCNV1Q6PIU1 500 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 KCNH3Q9ULD8 1083 aa15.98■□□□□ 0.15
SF1-201ENST00000227503 ADD2P35612 726 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 MRPS25P82663 173 aaKnown RBP15.97■□□□□ 0.15
SF1-201ENST00000227503 FKBP15Q5T1M5 1219 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 CAPZA3Q96KX2 299 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 KAT14Q9H8E8 782 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 PRPF6O94906 941 aaKnown RBP15.97■□□□□ 0.15
SF1-201ENST00000227503 CASP14P31944 242 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 PPARDQ03181 441 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 CCDC102BQ68D86 513 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 KIF6Q6ZMV9 814 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 DNAJC10Q8IXB1 793 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 SMYD4Q8IYR2 804 aaPredicted RBP15.97■□□□□ 0.15
SF1-201ENST00000227503 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
SF1-201ENST00000227503 MYH7P12883 1935 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 AKAP11Q9UKA4 1901 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 GGCXP38435 758 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 TBC1D10CQ8IV04 446 aa15.97■□□□□ 0.15
SF1-201ENST00000227503 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
SF1-201ENST00000227503 MYBL2P10244 700 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 ZNF18P17022 549 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 HNRNPH1P31943 449 aaKnown RBP15.96■□□□□ 0.15
SF1-201ENST00000227503 CYB5R4Q7L1T6 521 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SF1-201ENST00000227503 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.96■□□□□ 0.156e-7■□□□□ 10.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms