RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 VPS36Q86VN1 386 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 FAM76AQ8TAV0 307 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 TRIM31Q9BZY9 425 aa15.46■□□□□ 0.06
NFKB1-201ENST00000226574 PSDA5PKW4 1024 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 PNMA6AP0CW24 399 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 CERS3Q8IU89 383 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 JAKMIP2Q96AA8 810 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 DDX41Q9UJV9 622 aaKnown RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 TERF2Q15554 542 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 RASGRP4Q8TDF6 673 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 EPSTI1Q96J88 318 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 PARD6BQ9BYG5 372 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 TTF2Q9UNY4 1162 aaKnown RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 CDK12Q9NYV4 1490 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 SH3TC1Q8TE82 1336 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 BAG3O95817 575 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 PTGDRQ13258 359 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 TTC31Q49AM3 519 aaPredicted RBP15.45■□□□□ 0.06
NFKB1-201ENST00000226574 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 TMTC1Q8IUR5 882 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 OTUD6BQ8N6M0 293 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 MED14O60244 1454 aa15.45■□□□□ 0.06
NFKB1-201ENST00000226574 ZFYVE16Q7Z3T8 1539 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 VAV2P52735 878 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 LONRF2Q1L5Z9 754 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
NFKB1-201ENST00000226574 TYW1BQ6NUM6 668 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 AFAP1L1Q8TED9 768 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 POLR3EQ9NVU0 708 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 PCDHB6Q9Y5E3 794 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 KIF1BO60333 1816 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 TNKSO95271 1327 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
NFKB1-201ENST00000226574 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 CALML3P27482 149 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 HNRNPH2P55795 449 aaKnown RBP15.44■□□□□ 0.06
NFKB1-201ENST00000226574 RAPGEF1Q13905 1077 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 LPIN2Q92539 896 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 GPKOWQ92917 476 aaPredicted RBP eCLIP15.44■□□□□ 0.06
NFKB1-201ENST00000226574 ZSWIM5Q9P217 1185 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 ATP7BP35670 1465 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 NDUFAB1O14561 156 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 GNAT2P19087 354 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 NLRP3Q96P20 1036 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 NCOA3Q9Y6Q9 1424 aa15.44■□□□□ 0.06
NFKB1-201ENST00000226574 RBL2Q08999 1139 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 CFAP58Q5T655 872 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 SYMPKQ92797 1274 aaKnown RBP15.43■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA6CA6NDK9 693 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA6DP0CG33 693 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 DPF2Q92785 391 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA6AQ9NYA3 693 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 PPP1R12BO60237 982 aaPredicted RBP15.43■□□□□ 0.06
NFKB1-201ENST00000226574 PLS1Q14651 629 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA8HP0CJ92 632 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 ATP1A2P50993 1020 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 SEPT7Q16181 437 aaKnown RBP15.43■□□□□ 0.06
NFKB1-201ENST00000226574 C2CD5Q86YS7 1000 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 KLHL7Q8IXQ5 586 aa15.43■□□□□ 0.06
NFKB1-201ENST00000226574 PYM1Q9BRP8 204 aaKnown RBP15.43■□□□□ 0.06
NFKB1-201ENST00000226574 ZMYM6O95789 1325 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 PDE8AO60658 829 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 MAGEA1P43355 309 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 FMR1NBQ8N0W7 255 aaPredicted RBP15.42■□□□□ 0.06
NFKB1-201ENST00000226574 TULP4Q9NRJ4 1543 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 TMEM132AQ24JP5 1023 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 KRT79Q5XKE5 535 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.42■□□□□ 0.06
NFKB1-201ENST00000226574 FAN1Q9Y2M0 1017 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 STX10O60499 249 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 ZSCAN20P17040 1043 aaPredicted RBP15.42■□□□□ 0.06
NFKB1-201ENST00000226574 DCAF17Q5H9S7 520 aaPredicted RBP15.42■□□□□ 0.06
NFKB1-201ENST00000226574 SAR1BQ9Y6B6 198 aa15.42■□□□□ 0.06
NFKB1-201ENST00000226574 UBE4AQ14139 1066 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 MAN1B1Q9UKM7 699 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 RTL9Q8NET4 1388 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 ABCA6Q8N139 1617 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA6L10A0A0M3HER8 536 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 GOLGA6BA6NDN3 693 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 KCNJ18B7U540 433 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 PPARAQ07869 468 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 SCARF1Q14162 830 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 KCNJ12Q14500 433 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 ABCC3O15438 1527 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 CXCR5P32302 372 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 TFAP4Q01664 338 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 CYP27A1Q02318 531 aa15.41■□□□□ 0.06
NFKB1-201ENST00000226574 IQCB1Q15051 598 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms