RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 AFG3L2Q9Y4W6 797 aa15.23■□□□□ 0.03
LSM5-201ENST00000223084 TRIM75PA6NK02 468 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 BTBD19C9JJ37 291 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 SHMT1P34896 483 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 GABPAQ06546 454 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 MOGSQ13724 837 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
LSM5-201ENST00000223084 EPB41L4AQ9HCS5 686 aaPredicted RBP15.22■□□□□ 0.03
LSM5-201ENST00000223084 CXCL11O14625 94 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 ALDH1A1P00352 501 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 GH2P01242 217 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 CENPBP07199 599 aaPredicted RBP15.21■□□□□ 0.03
LSM5-201ENST00000223084 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 TATDN1Q6P1N9 297 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
LSM5-201ENST00000223084 PTPRFP10586 1907 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
LSM5-201ENST00000223084 APPP05067 770 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 GNAT2P19087 354 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 SPP2Q13103 211 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 NMIQ13287 307 aaPredicted RBP15.2■□□□□ 0.02
LSM5-201ENST00000223084 CRHR2Q13324 411 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 CERKLQ49MI3 558 aaPredicted RBP15.2■□□□□ 0.02
LSM5-201ENST00000223084 SKAP1Q86WV1 359 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 STK11IPQ8N1F8 1099 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
LSM5-201ENST00000223084 A0A0G2JLL6 359 aaPredicted RBP15.19■□□□□ 0.02
LSM5-201ENST00000223084 GPR25O00155 361 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 NEFLP07196 543 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 ASNSP08243 561 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 GSPT1P15170 499 aaKnown RBP15.19■□□□□ 0.02
LSM5-201ENST00000223084 SDSP20132 328 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 DGKZQ13574 1117 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 TAF1CQ15572 869 aaPredicted RBP15.19■□□□□ 0.02
LSM5-201ENST00000223084 TTC22Q5TAA0 569 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
LSM5-201ENST00000223084 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 IFNL3Q8IZI9 196 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
LSM5-201ENST00000223084 MINDY4BA8MYZ0 360 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 PDHXO00330 501 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 FOXP2O15409 715 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 TDO2P48775 406 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 CDK8P49336 464 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 ABCB5Q2M3G0 1257 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 GPAT2Q6NUI2 795 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
LSM5-201ENST00000223084 ZNF296Q8WUU4 475 aaPredicted RBP15.18■□□□□ 0.02
LSM5-201ENST00000223084 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
LSM5-201ENST00000223084 ARPP21Q9UBL0 812 aaPredicted RBP15.18■□□□□ 0.02
LSM5-201ENST00000223084 MYH8P13535 1937 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 MPHOSPH10O00566 681 aaKnown RBP15.17■□□□□ 0.02
LSM5-201ENST00000223084 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 HMGCS2P54868 508 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 RAB3GAP1Q15042 981 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 SBK1Q52WX2 424 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 ANKRD23Q86SG2 305 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 ZNF589Q86UQ0 364 aaPredicted RBP15.17■□□□□ 0.02
LSM5-201ENST00000223084 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 AS3MTQ9HBK9 375 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 ZFYVE28Q9HCC9 887 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 GINM1Q9NU53 330 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
LSM5-201ENST00000223084 AKR1B1P15121 316 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 MTMR2Q13614 643 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 SEPT2Q15019 361 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 FASTKD5Q7L8L6 764 aaKnown RBP15.16■□□□□ 0.02
LSM5-201ENST00000223084 CCDC136Q96JN2 1154 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 NACAP1Q9BZK3 213 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 NAPBQ9H115 298 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
LSM5-201ENST00000223084 FKTNO75072 461 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 BACE1P56817 501 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 TREML2Q5T2D2 321 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
LSM5-201ENST00000223084 TICAM2Q86XR7 235 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 ZCCHC17Q9NP64 241 aaKnown RBP15.15■□□□□ 0.02
LSM5-201ENST00000223084 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
LSM5-201ENST00000223084 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
LSM5-201ENST00000223084 CYP2C8P10632 490 aa15.14■□□□□ 0.01
LSM5-201ENST00000223084 ZYXQ15942 572 aaKnown RBP15.14■□□□□ 0.01
LSM5-201ENST00000223084 CLEC10AQ8IUN9 316 aa15.14■□□□□ 0.01
LSM5-201ENST00000223084 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
LSM5-201ENST00000223084 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
LSM5-201ENST00000223084 TLR2O60603 784 aa15.13■□□□□ 0.01
LSM5-201ENST00000223084 PRDM1O75626 825 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms