RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CSADQ9Y600 493 aa15.58■□□□□ 0.08
TIMP1-201ENST00000218388 DOCK1Q14185 1865 aa15.58■□□□□ 0.08
TIMP1-201ENST00000218388 ATAD5Q96QE3 1844 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 OTOFQ9HC10 1997 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 TSPY2A6NKD2 308 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 E7EWF7 191 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 RANBP6O60518 1105 aaKnown RBP15.57■□□□□ 0.08
TIMP1-201ENST00000218388 PRDM1O75626 825 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 RASA1P20936 1047 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 CAP2P40123 477 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 ANAPC15P60006 121 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.08
TIMP1-201ENST00000218388 ABCB5Q2M3G0 1257 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 ANKRD13AQ8IZ07 590 aa15.57■□□□□ 0.08
TIMP1-201ENST00000218388 PHF20L1A8MW92 1017 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 MPHOSPH10O00566 681 aaKnown RBP15.56■□□□□ 0.08
TIMP1-201ENST00000218388 ASNSP08243 561 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 TSPY3P0CV98 308 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 TSPY8P0CW00 308 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 PSMA5P28066 241 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 NOL9Q5SY16 702 aaKnown RBP15.56■□□□□ 0.08
TIMP1-201ENST00000218388 TMEM179Q6ZVK1 233 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 SCYL3Q8IZE3 742 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 C22orf23Q9BZE7 217 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 PICK1Q9NRD5 415 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 SNX14Q9Y5W7 946 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 NEDD4P46934 1319 aa15.56■□□□□ 0.08
TIMP1-201ENST00000218388 TMEM88BA6NKF7 163 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 GDF11O95390 407 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 HMGB1P09429 215 aaKnown RBP15.55■□□□□ 0.08
TIMP1-201ENST00000218388 SLURP2P0DP57 97 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 INPP5BP32019 993 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 CST9Q5W186 159 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 IQCA1Q86XH1 822 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 FZD1Q9UP38 647 aa15.55■□□□□ 0.08
TIMP1-201ENST00000218388 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 B4E1Z4 1266 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 UBE2Q2LH0YL09 131 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 KDM4AO75164 1064 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 GH2P01242 217 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 AKR1B1P15121 316 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 TFAP4Q01664 338 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 VGLL4Q14135 290 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 CCDC178Q5BJE1 867 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 STOX1Q6ZVD7 989 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 ZKSCAN4Q969J2 545 aaPredicted RBP15.54■□□□□ 0.08
TIMP1-201ENST00000218388 NEK1Q96PY6 1258 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 INCENPQ9NQS7 918 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
TIMP1-201ENST00000218388 ZBTB21Q9ULJ3 1066 aa15.54■□□□□ 0.08
TIMP1-201ENST00000218388 MCM5P33992 734 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 APLP1P51693 650 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 HUNKP57058 714 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 SART3Q15020 963 aaKnown RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 RAB3GAP1Q15042 981 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 FAM47AQ5JRC9 791 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 LDLRAD1Q5T700 205 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 MOB2Q70IA6 237 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 UBAC1Q9BSL1 405 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 AS3MTQ9HBK9 375 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 ABT1Q9ULW3 272 aaKnown RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 TACC3Q9Y6A5 838 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 TAF6LQ9Y6J9 622 aa15.53■□□□□ 0.08
TIMP1-201ENST00000218388 GREB1LQ9C091 1923 aaPredicted RBP15.53■□□□□ 0.08
TIMP1-201ENST00000218388 ERICH2A1L162 156 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 RRP1BQ14684 758 aaKnown RBP15.52■□□□□ 0.08
TIMP1-201ENST00000218388 BLOC1S2Q6QNY1 142 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 MB21D2Q8IYB1 491 aaPredicted RBP15.52■□□□□ 0.08
TIMP1-201ENST00000218388 SLC10A4Q96EP9 437 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 MTA3Q9BTC8 594 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 KANSL2Q9H9L4 492 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 CREBZFQ9NS37 354 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 TCP11L1Q9NUJ3 509 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 SNCAIPQ9Y6H5 919 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 TLL2Q9Y6L7 1015 aa15.52■□□□□ 0.08
TIMP1-201ENST00000218388 WDR19Q8NEZ3 1342 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 PTPRAP18433 802 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ICA1Q05084 483 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ADCK5Q3MIX3 580 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 DHX32Q7L7V1 743 aaKnown RBP15.51■□□□□ 0.07
TIMP1-201ENST00000218388 SAPCD2Q86UD0 394 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ERO1BQ86YB8 467 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 HHIPL1Q96JK4 782 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 TBC1D32Q96NH3 1257 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ARHGEF10LQ9HCE6 1279 aa15.51■□□□□ 0.07
TIMP1-201ENST00000218388 ZSWIM5Q9P217 1185 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms