RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 JAKMIP1Q96N16 626 aaKnown RBP32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 TBC1D32Q96NH3 1257 aa32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 KRT23Q9C075 422 aa32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 MPHOSPH10O00566 681 aaKnown RBP32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 KDM4AO75164 1064 aa32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 AKR1B1P15121 316 aa32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 INPP5BP32019 993 aa32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 RBM25P49756 843 aaKnown RBP32.22■■■□□ 2.75
CHMP4B-201ENST00000217402 IREB2P48200 963 aaKnown RBP32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 ANAPC15P60006 121 aa32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 FSTL1Q12841 308 aa32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 COL9A3Q14050 684 aaPredicted RBP32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 ESR2Q92731 530 aa32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 GBA2Q9HCG7 927 aaPredicted RBP32.21■■■□□ 2.75
CHMP4B-201ENST00000217402 TSPY2A6NKD2 308 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 TFAP4Q01664 338 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 CST9Q5W186 159 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 ARMC9Q7Z3E5 817 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 NEK1Q96PY6 1258 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 ZNF112Q9UJU3 913 aa32.2■■■□□ 2.75
CHMP4B-201ENST00000217402 TSPY3P0CV98 308 aa32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 TSPY8P0CW00 308 aa32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 JAG1P78504 1218 aa32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 ABCB5Q2M3G0 1257 aa32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.19■■■□□ 2.748e-30■■□□□ 13
CHMP4B-201ENST00000217402 ZKSCAN4Q969J2 545 aaPredicted RBP32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.19■■■□□ 2.74
CHMP4B-201ENST00000217402 CAP2P40123 477 aa32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 CCDC17Q96LX7 622 aa32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 PAPPA2Q9BXP8 1791 aa32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 GH2P01242 217 aa32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 MB21D2Q8IYB1 491 aaPredicted RBP32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 C2orf69Q8N8R5 385 aa32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.18■■■□□ 2.74
CHMP4B-201ENST00000217402 TRPM7Q96QT4 1865 aa32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 UBE2Q2LH0YL09 131 aa32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 CPA1P15085 419 aa32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 CASTP20810 708 aaKnown RBP32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 CYB5R4Q7L1T6 521 aa32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 CHST3Q7LGC8 479 aa32.17■■■□□ 2.74
CHMP4B-201ENST00000217402 OTOFQ9HC10 1997 aa32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 CTNND1O60716 968 aaKnown RBP32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 PSMA5P28066 241 aa32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 MAP3K11Q16584 847 aa32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 ZSWIM5Q9P217 1185 aa32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 ZBTB21Q9ULJ3 1066 aa32.16■■■□□ 2.74
CHMP4B-201ENST00000217402 FKBP1BP68106 108 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 MAP3K9P80192 1104 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 ZKSCAN3Q9BRR0 538 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 CABP5Q9NP86 173 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 VGLL4Q14135 290 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 RAB3GAP1Q15042 981 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 BLOC1S2Q6QNY1 142 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 SCYL3Q8IZE3 742 aa32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 UPF3BQ9BZI7 483 aaKnown RBP32.15■■■□□ 2.74
CHMP4B-201ENST00000217402 NMT2O60551 498 aa32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 CLEC10AQ8IUN9 316 aa32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 NEDD1Q8NHV4 660 aa32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 TCEANC2Q96MN5 208 aa32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 CSADQ9Y600 493 aa32.14■■■□□ 2.74
CHMP4B-201ENST00000217402 ANTXR2P58335 489 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 SEPT2Q15019 361 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 TMEM179Q6ZVK1 233 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 ANKRD13AQ8IZ07 590 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 IL17RAQ96F46 866 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 CLMNQ96JQ2 1002 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 KIF2CQ99661 725 aa32.13■■■□□ 2.73
CHMP4B-201ENST00000217402 DOCK1Q14185 1865 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 PRC1O43663 620 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 ASNSP08243 561 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 MCM5P33992 734 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 CCDC84Q86UT8 332 aaPredicted RBP32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 TM6SF1Q9BZW5 370 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 PICK1Q9NRD5 415 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 PLIN4Q96Q06 1357 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 ATAD5Q96QE3 1844 aa32.12■■■□□ 2.73
CHMP4B-201ENST00000217402 HMGB1P09429 215 aaKnown RBP32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 GUCY1A2P33402 732 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 NT5C2P49902 561 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 NOL9Q5SY16 702 aaKnown RBP32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 ZSWIM6Q9HCJ5 1215 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 SNCAIPQ9Y6H5 919 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 LDLRAD1Q5T700 205 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 DHX32Q7L7V1 743 aaKnown RBP32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 IQCA1Q86XH1 822 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 UBAC1Q9BSL1 405 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 LRRC2Q9BYS8 371 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 IL17RBQ9NRM6 502 aa32.11■■■□□ 2.73
CHMP4B-201ENST00000217402 RPS6KB1P23443 525 aa32.1■■■□□ 2.73
CHMP4B-201ENST00000217402 CEP95Q96GE4 821 aa32.1■■■□□ 2.73
CHMP4B-201ENST00000217402 ELP3Q9H9T3 547 aa32.1■■■□□ 2.73
CHMP4B-201ENST00000217402 CYP46A1Q9Y6A2 500 aa32.1■■■□□ 2.73
CHMP4B-201ENST00000217402 RUFY3Q7L099 469 aa32.09■■■□□ 2.73
CHMP4B-201ENST00000217402 ZSCAN10Q96SZ4 725 aaPredicted RBP32.09■■■□□ 2.73
CHMP4B-201ENST00000217402 GREB1LQ9C091 1923 aaPredicted RBP32.09■■■□□ 2.73
CHMP4B-201ENST00000217402 IGKV6D-41A0A0C4DH26 115 aa32.08■■■□□ 2.73
CHMP4B-201ENST00000217402 HUNKP57058 714 aa32.08■■■□□ 2.73
CHMP4B-201ENST00000217402 ICA1Q05084 483 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms