RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 FAM47AQ5JRC9 791 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 NBPF11Q86T75 865 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 GJB4Q9NTQ9 266 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 DACT1Q9NYF0 836 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 XBP1P17861 261 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 SF3A1Q15459 793 aaKnown RBP20.16■□□□□ 0.82
VRK1-201ENST00000216639 MAP3K11Q16584 847 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 ZNF444Q8N0Y2 327 aaPredicted RBP20.16■□□□□ 0.82
VRK1-201ENST00000216639 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
VRK1-201ENST00000216639 FTOQ9C0B1 505 aaKnown RBP eCLIP20.16■□□□□ 0.82
VRK1-201ENST00000216639 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 KIF28PB7ZC32 967 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 TFAP4Q01664 338 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 EVX2Q03828 476 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 TROAPQ12815 778 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 CCDC73Q6ZRK6 1079 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 PODNQ7Z5L7 613 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 DGKHQ86XP1 1220 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 TNMDQ9H2S6 317 aa20.16■□□□□ 0.82
VRK1-201ENST00000216639 U2AF2P26368 475 aaKnown RBP eCLIP20.15■□□□□ 0.82
VRK1-201ENST00000216639 BAG6P46379 1132 aa20.15■□□□□ 0.82
VRK1-201ENST00000216639 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
VRK1-201ENST00000216639 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
VRK1-201ENST00000216639 LINC00301Q8NCQ3 95 aa20.15■□□□□ 0.82
VRK1-201ENST00000216639 CLSTN2Q9H4D0 955 aa20.15■□□□□ 0.82
VRK1-201ENST00000216639 FLT1P17948 1338 aa20.14■□□□□ 0.82
VRK1-201ENST00000216639 PRPF3O43395 683 aaKnown RBP20.14■□□□□ 0.81
VRK1-201ENST00000216639 MMP1P03956 469 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 TSPY3P0CV98 308 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 TSPY8P0CW00 308 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 RHBDL3P58872 404 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 SLC4A8Q2Y0W8 1093 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 ANO1Q5XXA6 986 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 CCAR1Q8IX12 1150 aaKnown RBP20.14■□□□□ 0.81
VRK1-201ENST00000216639 KAT14Q9H8E8 782 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 SAP30BPQ9UHR5 308 aaKnown RBP20.14■□□□□ 0.81
VRK1-201ENST00000216639 DAGLAQ9Y4D2 1042 aa20.14■□□□□ 0.81
VRK1-201ENST00000216639 CCDC192P0DO97 292 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 KIF5BP33176 963 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 ADALQ6DHV7 355 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.13■□□□□ 0.81
VRK1-201ENST00000216639 TCP11L1Q9NUJ3 509 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 TTF2Q9UNY4 1162 aaKnown RBP20.13■□□□□ 0.81
VRK1-201ENST00000216639 CLIC4Q9Y696 253 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 A0A1W2PQ27 194 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 A0A1W2PQ64 194 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 A0A1W2PQD8 194 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 SPTLC2O15270 562 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 NMT2O60551 498 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 NR1I2O75469 434 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 CMTR1Q8N1G2 835 aaKnown RBP20.13■□□□□ 0.81
VRK1-201ENST00000216639 ANKS1AQ92625 1134 aa20.13■□□□□ 0.81
VRK1-201ENST00000216639 FOXP1Q9H334 677 aaPredicted RBP20.13■□□□□ 0.81
VRK1-201ENST00000216639 CTAGE5O15320 804 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 GUCY1A2P33402 732 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 PLCD1P51178 756 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 UVSSAQ2YD98 709 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 TMTC3Q6ZXV5 915 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 JMYQ8N9B5 988 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 RNF214Q8ND24 703 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 PCDHA7Q9UN72 937 aa20.12■□□□□ 0.81
VRK1-201ENST00000216639 CDK5RAP2Q96SN8 1893 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 F8W031 263 aaPredicted RBP20.11■□□□□ 0.81
VRK1-201ENST00000216639 CAMK4Q16566 473 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 C16orf86Q6ZW13 317 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 NOSTRINQ8IVI9 506 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 PPP1R9BQ96SB3 815 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 FUCA2Q9BTY2 467 aa20.11■□□□□ 0.81
VRK1-201ENST00000216639 FAM160A1Q05DH4 1040 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 DDX60LQ5H9U9 1706 aaKnown RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 RCSD1Q6JBY9 416 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 HHIPL2Q6UWX4 724 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 DIS3L2Q8IYB7 885 aaKnown RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 CERS5Q8N5B7 392 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 MRPS27Q92552 414 aaKnown RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 TEKT1Q969V4 418 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 UBE2Q2LH0YL09 131 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 CHRNA5P30532 468 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 FKBP1AP62942 108 aaKnown RBP20.1■□□□□ 0.81
VRK1-201ENST00000216639 FUT2Q10981 343 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 SLC39A14Q15043 492 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 FSIP1Q8NA03 581 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
VRK1-201ENST00000216639 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 RASA1P20936 1047 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 CDK8P49336 464 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 RBM43Q6ZSC3 357 aaKnown RBP20.09■□□□□ 0.81
VRK1-201ENST00000216639 DBNDD1Q9H9R9 158 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 IL17RBQ9NRM6 502 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 KCNJ14Q9UNX9 436 aa20.09■□□□□ 0.81
VRK1-201ENST00000216639 V9GY48 417 aaPredicted RBP20.09■□□□□ 0.81
VRK1-201ENST00000216639 BTBD18B2RXH4 712 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms