RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 DDNO94850 711 aaPredicted RBP18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 DDIT3P35638 169 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 SEC23AQ15436 765 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 TBC1D10BQ4KMP7 808 aaPredicted RBP18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 FAM83AQ86UY5 434 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 FOXP4Q8IVH2 680 aaPredicted RBP18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 GTF3C6Q969F1 213 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 SENP2Q9HC62 589 aa18.73■□□□□ 0.59
SNRPD3-201ENST00000215829 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
SNRPD3-201ENST00000215829 TCP11L1Q9NUJ3 509 aa18.72■□□□□ 0.59
SNRPD3-201ENST00000215829 CNTNAP1P78357 1384 aa18.72■□□□□ 0.59
SNRPD3-201ENST00000215829 TSPY3P0CV98 308 aa18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 TSPY8P0CW00 308 aa18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 SCRN1Q12765 414 aa18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 METTL16Q86W50 562 aaKnown RBP18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 ENAHQ8N8S7 591 aaPredicted RBP18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 NAP1L2Q9ULW6 460 aaPredicted RBP18.71■□□□□ 0.59
SNRPD3-201ENST00000215829 CCDC69A6NI79 296 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 CCDC178Q5BJE1 867 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 SIPA1L1O43166 1804 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 NMT2O60551 498 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 SHMT1P34896 483 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 EPS15P42566 896 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 DPY19L2Q6NUT2 758 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 CRACR2BQ8N4Y2 399 aaPredicted RBP18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 NEDD1Q8NHV4 660 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 CHMP4CQ96CF2 233 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 IL17RBQ9NRM6 502 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 ZC3H4Q9UPT8 1303 aaKnown RBP18.7■□□□□ 0.58
SNRPD3-201ENST00000215829 TNNI2P48788 182 aa18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 CCT2P78371 535 aaKnown RBP18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 TNFAIP1Q13829 316 aa18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 IFIT1BQ5T764 474 aaKnown RBP18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 DGKHQ86XP1 1220 aa18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 CSRNP1Q96S65 589 aa18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 DNAJC18Q9H819 358 aa18.69■□□□□ 0.58
SNRPD3-201ENST00000215829 ZBTB43O43298 467 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 ANKS1AQ92625 1134 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 TRIM34Q9BYJ4 488 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 CHMP5Q9NZZ3 219 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 HACL1Q9UJ83 578 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 CIZ1Q9ULV3 898 aaPredicted RBP18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 SMC3Q9UQE7 1217 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 MYH8P13535 1937 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 LMOD1P29536 600 aaPredicted RBP18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 TATDN1Q6P1N9 297 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 LLPHQ9BRT6 129 aaKnown RBP18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 TMEM39BQ9GZU3 492 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
SNRPD3-201ENST00000215829 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 METAP2P50579 478 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 RCAN1P53805 252 aa18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 RASA3Q14644 834 aa18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 RCSD1Q6JBY9 416 aa18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 CCDC17Q96LX7 622 aa18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 NCOA5Q9HCD5 579 aaKnown RBP18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 HERC5Q9UII4 1024 aaKnown RBP18.67■□□□□ 0.58
SNRPD3-201ENST00000215829 PLIN4Q96Q06 1357 aa18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 DHX16O60231 1041 aaKnown RBP18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 AKR1B1P15121 316 aa18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 ZNF654Q8IZM8 581 aa18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 ADARB2Q9NS39 739 aaKnown RBP18.66■□□□□ 0.58
SNRPD3-201ENST00000215829 HIRAP54198 1017 aaPredicted RBP18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 MICU3Q86XE3 530 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 MYL10Q9BUA6 226 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 NID2Q14112 1375 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 FAM196BA6NMK8 535 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 TBC1D12O60347 775 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 CTDNEP1O95476 244 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 RXRAP19793 462 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 GJB2P29033 226 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 NOVP48745 357 aa18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 CERKLQ49MI3 558 aaPredicted RBP18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNRPD3-201ENST00000215829 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 GLTPD2A6NH11 291 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 ANGEL2Q5VTE6 544 aaKnown RBP18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 NSUN7Q8NE18 718 aaKnown RBP18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 SMARCC2Q8TAQ2 1214 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 CEP95Q96GE4 821 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 TEPSINQ96N21 525 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 SCAF8Q9UPN6 1271 aaKnown RBP18.64■□□□□ 0.57
SNRPD3-201ENST00000215829 CALM1P0DP23 149 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CALM2P0DP24 149 aa18.63■□□□□ 0.57
SNRPD3-201ENST00000215829 CALM3P0DP25 149 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms