RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 FOXP1Q9H334 677 aaPredicted RBP22.82■■□□□ 1.24
MMP11-201ENST00000215743 PDS5AQ29RF7 1337 aaKnown RBP22.82■■□□□ 1.24
MMP11-201ENST00000215743 NLRP12P59046 1061 aa22.82■■□□□ 1.24
MMP11-201ENST00000215743 PNOCQ13519 176 aa22.82■■□□□ 1.24
MMP11-201ENST00000215743 LRRC4BQ9NT99 713 aa22.82■■□□□ 1.24
MMP11-201ENST00000215743 PCDHB6Q9Y5E3 794 aa22.82■■□□□ 1.24
MMP11-201ENST00000215743 LY75O60449 1722 aa22.81■■□□□ 1.24
MMP11-201ENST00000215743 CDC25BP30305 580 aa22.81■■□□□ 1.24
MMP11-201ENST00000215743 TERF1P54274 439 aa22.81■■□□□ 1.24
MMP11-201ENST00000215743 KRI1Q8N9T8 703 aaKnown RBP22.81■■□□□ 1.24
MMP11-201ENST00000215743 RNF26Q9BY78 433 aaPredicted RBP22.81■■□□□ 1.24
MMP11-201ENST00000215743 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.81■■□□□ 1.24
MMP11-201ENST00000215743 SPATA31A6Q5VVP1 1343 aa22.81■■□□□ 1.24
MMP11-201ENST00000215743 IRS2Q9Y4H2 1338 aa22.81■■□□□ 1.24
MMP11-201ENST00000215743 GRAPQ13588 217 aa22.8■■□□□ 1.24
MMP11-201ENST00000215743 GRAPLQ8TC17 118 aaPredicted RBP22.8■■□□□ 1.24
MMP11-201ENST00000215743 MRFAP1L1Q96HT8 127 aa22.8■■□□□ 1.24
MMP11-201ENST00000215743 CABP5Q9NP86 173 aa22.8■■□□□ 1.24
MMP11-201ENST00000215743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.8■■□□□ 1.24
MMP11-201ENST00000215743 FAM205CA6NFA0 338 aa22.8■■□□□ 1.24
MMP11-201ENST00000215743 ARID5BQ14865 1188 aa22.8■■□□□ 1.24
MMP11-201ENST00000215743 CACTINQ8WUQ7 758 aaKnown RBP22.8■■□□□ 1.24
MMP11-201ENST00000215743 V9GY48 417 aaPredicted RBP22.8■■□□□ 1.24
MMP11-201ENST00000215743 FGRP09769 529 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 PKN1Q16512 942 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 LONRF3Q496Y0 759 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 RILPL1Q5EBL4 403 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 TIGD1Q96MW7 591 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 MCM9Q9NXL9 1143 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 KCNH3Q9ULD8 1083 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 MYH6P13533 1939 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 USP17L8P0C7I0 530 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 TROAPQ12815 778 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 FILIP1Q7Z7B0 1213 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 ATP8A2Q9NTI2 1148 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 MAST2Q6P0Q8 1798 aa22.79■■□□□ 1.24
MMP11-201ENST00000215743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.78■■□□□ 1.24
MMP11-201ENST00000215743 RBM6P78332 1123 aaKnown RBP22.78■■□□□ 1.24
MMP11-201ENST00000215743 FUT2Q10981 343 aa22.78■■□□□ 1.24
MMP11-201ENST00000215743 CNNM3Q8NE01 707 aa22.78■■□□□ 1.24
MMP11-201ENST00000215743 ARPP21Q9UBL0 812 aaPredicted RBP22.78■■□□□ 1.24
MMP11-201ENST00000215743 PCP11498 1178 aaKnown RBP22.78■■□□□ 1.24
MMP11-201ENST00000215743 GRIK5Q16478 980 aa22.78■■□□□ 1.24
MMP11-201ENST00000215743 FBXO2Q9UK22 296 aaPredicted RBP22.78■■□□□ 1.24
MMP11-201ENST00000215743 AFF2P51816 1311 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 LAMB1P07942 1786 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 SBF2Q86WG5 1849 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 FOXN1O15353 648 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
MMP11-201ENST00000215743 DIXDC1Q155Q3 683 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 METTL16Q86W50 562 aaKnown RBP22.77■■□□□ 1.24
MMP11-201ENST00000215743 SEPT12Q8IYM1 358 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 CCDC88AQ3V6T2 1871 aa22.77■■□□□ 1.24
MMP11-201ENST00000215743 FAM237AA0A1B0GTK4 181 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 TSPY2A6NKD2 308 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 ORC4O43929 436 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 PPP2R5BQ15173 497 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 EARS2Q5JPH6 523 aaKnown RBP22.77■■□□□ 1.23
MMP11-201ENST00000215743 PRR5LQ6MZQ0 368 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 KRBA2Q6ZNG9 492 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 BPIFA3Q9BQP9 254 aa22.77■■□□□ 1.23
MMP11-201ENST00000215743 RBM28Q9NW13 759 aaKnown RBP22.77■■□□□ 1.23
MMP11-201ENST00000215743 XBP1P17861 261 aa22.76■■□□□ 1.23
MMP11-201ENST00000215743 USP5P45974 858 aa22.76■■□□□ 1.23
MMP11-201ENST00000215743 SPTY2D1Q68D10 685 aaPredicted RBP22.76■■□□□ 1.23
MMP11-201ENST00000215743 KIAA1551Q9HCM1 1747 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 PRPF3O43395 683 aaKnown RBP22.75■■□□□ 1.23
MMP11-201ENST00000215743 DDAH1O94760 285 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 SMC2O95347 1197 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 CALM1P0DP23 149 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 CALM2P0DP24 149 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 CALM3P0DP25 149 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 TMTC3Q6ZXV5 915 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 SH3RF3Q8TEJ3 882 aaPredicted RBP22.75■■□□□ 1.23
MMP11-201ENST00000215743 RPGRQ92834 1020 aaKnown RBP22.75■■□□□ 1.23
MMP11-201ENST00000215743 TUBE1Q9UJT0 475 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 XDHP47989 1333 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 DLEC1Q9Y238 1755 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 PTPREP23469 700 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 KRT2P35908 639 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 PDE4BQ07343 736 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 CTCFLQ8NI51 663 aaPredicted RBP22.75■■□□□ 1.23
MMP11-201ENST00000215743 PHF20Q9BVI0 1012 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 LEMD3Q9Y2U8 911 aa22.75■■□□□ 1.23
MMP11-201ENST00000215743 SRBD1Q8N5C6 995 aaKnown RBP22.74■■□□□ 1.23
MMP11-201ENST00000215743 DYNLL2Q96FJ2 89 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 FAM13BQ9NYF5 915 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 CNTNAP5Q8WYK1 1306 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 GPSM2P81274 684 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 RBM10P98175 930 aaKnown RBP22.74■■□□□ 1.23
MMP11-201ENST00000215743 NCAPHQ15003 741 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 NOM1Q5C9Z4 860 aaKnown RBP22.74■■□□□ 1.23
MMP11-201ENST00000215743 PDILTQ8N807 584 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 IFNKQ9P0W0 207 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 EP400Q96L91 3159 aa22.74■■□□□ 1.23
MMP11-201ENST00000215743 POLR2DO15514 142 aaKnown RBP22.73■■□□□ 1.23
MMP11-201ENST00000215743 LMOD1P29536 600 aaPredicted RBP22.73■■□□□ 1.23
MMP11-201ENST00000215743 SBK1Q52WX2 424 aa22.73■■□□□ 1.23
MMP11-201ENST00000215743 FOXP4Q8IVH2 680 aaPredicted RBP22.73■■□□□ 1.23
MMP11-201ENST00000215743 LRRC8AQ8IWT6 810 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms