RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 ERICH2A1L162 156 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 TSPY2A6NKD2 308 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 EPHX2P34913 555 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 HIRAP54198 1017 aaPredicted RBP19.52■□□□□ 0.72
POLR2E-201ENST00000215587 RASA3Q14644 834 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 IQCA1Q86XH1 822 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 MTA3Q9BTC8 594 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 LRRC2Q9BYS8 371 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 TMEM39BQ9GZU3 492 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 ZSWIM5Q9P217 1185 aa19.52■□□□□ 0.72
POLR2E-201ENST00000215587 PITPNM2Q9BZ72 1349 aa19.51■□□□□ 0.71
POLR2E-201ENST00000215587 IFIT3O14879 490 aaKnown RBP19.51■□□□□ 0.71
POLR2E-201ENST00000215587 RASA1P20936 1047 aa19.51■□□□□ 0.71
POLR2E-201ENST00000215587 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
POLR2E-201ENST00000215587 TMEM67Q5HYA8 995 aa19.51■□□□□ 0.71
POLR2E-201ENST00000215587 HERC5Q9UII4 1024 aaKnown RBP19.51■□□□□ 0.71
POLR2E-201ENST00000215587 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
POLR2E-201ENST00000215587 TSPY3P0CV98 308 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 TSPY8P0CW00 308 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 CCDC178Q5BJE1 867 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 FBXL16Q8N461 479 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 BRF1Q92994 677 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 DCPSQ96C86 337 aaKnown RBP19.5■□□□□ 0.71
POLR2E-201ENST00000215587 ZSCAN31Q96LW9 406 aaPredicted RBP19.5■□□□□ 0.71
POLR2E-201ENST00000215587 AGXT2Q9BYV1 514 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 PCDH10Q9P2E7 1040 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 PPP2R3BQ9Y5P8 575 aa19.5■□□□□ 0.71
POLR2E-201ENST00000215587 SCN4AP35499 1836 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 SH2B2O14492 632 aaPredicted RBP19.49■□□□□ 0.71
POLR2E-201ENST00000215587 TFAP4Q01664 338 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 FAM47AQ5JRC9 791 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 METTL16Q86W50 562 aaKnown RBP19.49■□□□□ 0.71
POLR2E-201ENST00000215587 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 HOOK2Q96ED9 719 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 ZSCAN10Q96SZ4 725 aaPredicted RBP19.49■□□□□ 0.71
POLR2E-201ENST00000215587 DEFB129Q9H1M3 183 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 TAF1DQ9H5J8 278 aaPredicted RBP19.49■□□□□ 0.71
POLR2E-201ENST00000215587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.49■□□□□ 0.713e-8■■■■■ 31.5
POLR2E-201ENST00000215587 PRDM10Q9NQV6 1147 aa19.49■□□□□ 0.71
POLR2E-201ENST00000215587 ANGEL1Q9UNK9 670 aaKnown RBP19.49■□□□□ 0.71
POLR2E-201ENST00000215587 SHMT1P34896 483 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 WTAPQ15007 396 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 NFXL1Q6ZNB6 911 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 PNMA8AQ86V59 439 aaPredicted RBP19.48■□□□□ 0.71
POLR2E-201ENST00000215587 ZC3H15Q8WU90 426 aaKnown RBP19.48■□□□□ 0.71
POLR2E-201ENST00000215587 CCDC17Q96LX7 622 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 ZKSCAN3Q9BRR0 538 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 SH2B1Q9NRF2 756 aaPredicted RBP19.48■□□□□ 0.71
POLR2E-201ENST00000215587 SIPA1L1O43166 1804 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 TNKSO95271 1327 aa19.48■□□□□ 0.71
POLR2E-201ENST00000215587 FAM196BA6NMK8 535 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 EAPPQ56P03 285 aaPredicted RBP19.47■□□□□ 0.71
POLR2E-201ENST00000215587 TMTC2Q8N394 836 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 NEDD1Q8NHV4 660 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 IGDCC4Q8TDY8 1250 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 TMX3Q96JJ7 454 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 LARP6Q9BRS8 491 aaKnown RBP19.47■□□□□ 0.71
POLR2E-201ENST00000215587 DNAJC18Q9H819 358 aa19.47■□□□□ 0.71
POLR2E-201ENST00000215587 SCAF8Q9UPN6 1271 aaKnown RBP19.47■□□□□ 0.71
POLR2E-201ENST00000215587 PLIN4Q96Q06 1357 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 CCDC69A6NI79 296 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 TBC1D12O60347 775 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 HSP90AA1P07900 732 aaKnown RBP19.46■□□□□ 0.71
POLR2E-201ENST00000215587 LIFRP42702 1097 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 APOBRQ0VD83 1088 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 CERKLQ49MI3 558 aaPredicted RBP19.46■□□□□ 0.71
POLR2E-201ENST00000215587 SULF1Q8IWU6 871 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 TEPSINQ96N21 525 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 LY9Q9HBG7 655 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 GPHNQ9NQX3 736 aaPredicted RBP19.46■□□□□ 0.71
POLR2E-201ENST00000215587 CREBZFQ9NS37 354 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 TCP11L1Q9NUJ3 509 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 PGAP2Q9UHJ9 254 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 TPCN1Q9ULQ1 816 aa19.46■□□□□ 0.71
POLR2E-201ENST00000215587 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
POLR2E-201ENST00000215587 KLF18A0A0U1RQI7 1052 aa19.45■□□□□ 0.7
POLR2E-201ENST00000215587 MPHOSPH10O00566 681 aaKnown RBP19.45■□□□□ 0.7
POLR2E-201ENST00000215587 FOXN1O15353 648 aa19.45■□□□□ 0.7
POLR2E-201ENST00000215587 IFIT1BQ5T764 474 aaKnown RBP19.45■□□□□ 0.7
POLR2E-201ENST00000215587 DCAF15Q66K64 600 aa19.45■□□□□ 0.7
POLR2E-201ENST00000215587 TATDN1Q6P1N9 297 aa19.45■□□□□ 0.7
POLR2E-201ENST00000215587 CDAN1Q8IWY9 1227 aa19.45■□□□□ 0.7
POLR2E-201ENST00000215587 POTECB2RU33 542 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 AKR1B1P15121 316 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 SLC4A3P48751 1232 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 SEC23AQ15436 765 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 PPP4R3BQ5MIZ7 849 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 SYNE3Q6ZMZ3 975 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 SGMS1Q86VZ5 419 aa19.44■□□□□ 0.7
POLR2E-201ENST00000215587 ENAHQ8N8S7 591 aaPredicted RBP19.44■□□□□ 0.7
POLR2E-201ENST00000215587 ZNF274Q96GC6 653 aaPredicted RBP19.44■□□□□ 0.7
POLR2E-201ENST00000215587 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 NMT2O60551 498 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 SLURP2P0DP57 97 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 EVCP57679 992 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 SUPT20HL1Q3ZLR7 823 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 KRT26Q7Z3Y9 468 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 DGKHQ86XP1 1220 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 CHMP4CQ96CF2 233 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms