RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 NBPF14Q5TI25 921 aa22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 NBPF10Q6P3W6 841 aaKnown RBP22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 IFNL2Q8IZJ0 200 aa22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 NBPF15Q8N660 670 aa22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 AIDAQ96BJ3 306 aa22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.24
PPP1R3F-201ENST00000055335 LRP10Q7Z4F1 713 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 SYNE4Q8N205 404 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 LAMA4Q16363 1823 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 A0A1B0GTH6 734 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 MRPS25P82663 173 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 SART3Q15020 963 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 LRRC31Q6UY01 552 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 MICALL1Q8N3F8 863 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 ACBD3Q9H3P7 528 aa22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.77■■□□□ 1.24
PPP1R3F-201ENST00000055335 MFAP3LO75121 409 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 DNAJC21Q5F1R6 531 aaKnown RBP22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 GPIHBP1Q8IV16 184 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 CABLES1Q8TDN4 633 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 PANX2Q96RD6 677 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 ATG3Q9NT62 314 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 GPATCH11Q8N954 259 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 CCDC148Q8NFR7 591 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 CAGE1Q8TC20 777 aa22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 FBXO2Q9UK22 296 aaPredicted RBP22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 NOP2P46087 812 aaKnown RBP22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 TTC19Q6DKK2 380 aaPredicted RBP22.76■■□□□ 1.23
PPP1R3F-201ENST00000055335 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 KRT9P35527 623 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 HELBQ8NG08 1087 aaPredicted RBP22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 ZSWIM5Q9P217 1185 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 MYO6Q9UM54 1294 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 RGPD2P0DJD1 1756 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 MYO1BO43795 1136 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 GYPCP04921 128 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 PTPREP23469 700 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 GBP3Q9H0R5 595 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 RNF225M0QZC1 329 aaPredicted RBP22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 PIP4K2BP78356 416 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 CTR9Q6PD62 1173 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 NAPBQ9H115 298 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 EFCC1Q9HA90 598 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 JRKLQ9Y4A0 524 aa22.75■■□□□ 1.23
PPP1R3F-201ENST00000055335 MED1Q15648 1581 aaPredicted RBP22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 ZNF532Q9HCE3 1301 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 MCAMP43121 646 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 CHP1Q99653 195 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 CNNM1Q9NRU3 951 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 NTRK3Q16288 839 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 SPATA1Q5VX52 437 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 RRAGBQ5VZM2 374 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 FAM71BQ8TC56 605 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 AFAP1L1Q8TED9 768 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 GPR108Q9NPR9 543 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 FAM217BQ9NTX9 383 aaPredicted RBP22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
PPP1R3F-201ENST00000055335 ERVK-24P63145 666 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 PPARDQ03181 441 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 LDHAL6AQ6ZMR3 332 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 HNRNPLLQ8WVV9 542 aaKnown RBP22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 GPTP24298 496 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 CNGA4Q8IV77 575 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 PRDM1O75626 825 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 ICE2Q659A1 982 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 FBXL16Q8N461 479 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 MSANTD4Q8NCY6 345 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 DDX17Q92841 729 aaKnown RBP22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 LY9Q9HBG7 655 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 RAB21Q9UL25 225 aa22.73■■□□□ 1.23
PPP1R3F-201ENST00000055335 MYH15Q9Y2K3 1946 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 MMP1P03956 469 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 MAGEA9P43362 315 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 IFIT5Q13325 482 aaKnown RBP22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 RTN1Q16799 776 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 CRACR2AQ9BSW2 395 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 ADD3Q9UEY8 706 aaKnown RBP22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 TTF2Q9UNY4 1162 aaKnown RBP22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 A0A087X0B3 334 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 CYP27B1O15528 508 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 ZNF174Q15697 407 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 RASGRP2Q7LDG7 609 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 IGDCC4Q8TDY8 1250 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 VPS54Q9P1Q0 977 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 CPDO75976 1380 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 MATR3P43243 847 aaKnown RBP eCLIP22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 RILPL1Q5EBL4 403 aa22.72■■□□□ 1.23
PPP1R3F-201ENST00000055335 ACTN4O43707 911 aaKnown RBP22.71■■□□□ 1.23
PPP1R3F-201ENST00000055335 LIG3P49916 1009 aa22.71■■□□□ 1.23
PPP1R3F-201ENST00000055335 PIH1D3Q9NQM4 214 aaKnown RBP22.71■■□□□ 1.23
PPP1R3F-201ENST00000055335 SNAP23O00161 211 aa22.71■■□□□ 1.23
PPP1R3F-201ENST00000055335 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
PPP1R3F-201ENST00000055335 SARSP49591 514 aaKnown RBP22.7■■□□□ 1.23
PPP1R3F-201ENST00000055335 SYMPKQ92797 1274 aaKnown RBP22.7■■□□□ 1.23
PPP1R3F-201ENST00000055335 UBXN1Q04323 297 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 NAA15Q9BXJ9 866 aaKnown RBP22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 ARMT1Q9H993 441 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 USP5P45974 858 aa22.7■■□□□ 1.22
PPP1R3F-201ENST00000055335 TDO2P48775 406 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms