RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ZDHHC9Q9Y397 364 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 ELP1O95163 1332 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 BMP15O95972 392 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 ITGA6P23229 1130 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 MTIF2P46199 727 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 POLA2Q14181 598 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 B4GALNT4Q76KP1 1039 aa13.68□□□□□ -0.22
TSPAN9-201ENST00000011898 MBD4O95243 580 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 IDEP14735 1019 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 ZAP70P43403 619 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 OPA1O60313 960 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 CACNA2D4Q7Z3S7 1137 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 VAT1LQ9HCJ6 419 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 KCNQ2O43526 872 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 CEP85LQ5SZL2 805 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 PHKBQ93100 1093 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 JPH2Q9BR39 696 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 TFCP2L1Q9NZI6 479 aa13.67□□□□□ -0.22
TSPAN9-201ENST00000011898 CYP21A2P08686 494 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 CTAGE1Q96RT6 745 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 HAUS7Q99871 368 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 KCNH3Q9ULD8 1083 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 ACTN2P35609 894 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 BUB1BO60566 1050 aaPredicted RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 SASH1O94885 1247 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 FANCCQ00597 558 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 PPARDQ03181 441 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 CCDC6Q16204 474 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 TAF4BQ92750 862 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 CRNKL1Q9BZJ0 848 aaKnown RBP13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
TSPAN9-201ENST00000011898 PFKFB2O60825 505 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 GNAT2P19087 354 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 GRM1Q13255 1194 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 ADALQ6DHV7 355 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 ZNF274Q96GC6 653 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 KDM3BQ7LBC6 1761 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 CTAGE9A4FU28 777 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 SPAG1Q07617 926 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 KRT40Q6A162 431 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 MCTP2Q6DN12 878 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 CPLX4Q7Z7G2 160 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 RAB34Q9BZG1 259 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 BAIAP2L1Q9UHR4 511 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 USO1O60763 962 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 TRIM37O94972 964 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 DIS3L2Q8IYB7 885 aaKnown RBP13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 PPP1R12CQ9BZL4 782 aa13.65□□□□□ -0.22
TSPAN9-201ENST00000011898 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 SCRN1Q12765 414 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 FBF1Q8TES7 1133 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 KIAA1468Q9P260 1216 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 TDRD12Q587J7 1177 aaKnown RBP13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 ZNF569Q5MCW4 686 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 FBXO38Q6PIJ6 1188 aa13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 BAG1Q99933 345 aaPredicted RBP13.64□□□□□ -0.23
TSPAN9-201ENST00000011898 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 GOLGA6CA6NDK9 693 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 GOLGA6DP0CG33 693 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 GOLGA6AQ9NYA3 693 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 ODF2LQ9ULJ1 636 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 GLI3P10071 1580 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 POLR2DO15514 142 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 STAT6P42226 847 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 XPO4Q9C0E2 1151 aaKnown RBP13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
TSPAN9-201ENST00000011898 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms