RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Slit2Q9R1B9 1521 aa17.46■□□□□ 0.39
Upf1-202ENSMUST00000215817 Ccdc112A0AUP1 442 aa17.46■□□□□ 0.38
Upf1-202ENSMUST00000215817 Nxf7Q80SZ6 620 aaKnown RBP17.46■□□□□ 0.38
Upf1-202ENSMUST00000215817 Spata21Q8BHW6 681 aa17.46■□□□□ 0.38
Upf1-202ENSMUST00000215817 Kcnq2Q9Z351 759 aa17.46■□□□□ 0.38
Upf1-202ENSMUST00000215817 A0A1Y7VML8 143 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 NapaQ9DB05 295 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Med23Q80YQ2 1367 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Yipf1Q91VU1 306 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Rfc4Q99J62 364 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Esyt1Q3U7R1 1092 aaKnown RBP17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sun3Q5SS91 320 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Glrx3Q9CQM9 337 aa17.45■□□□□ 0.38
Upf1-202ENSMUST00000215817 Nmt2O70311 529 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sdc2P43407 202 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Cnot7Q60809 285 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Spef2Q8C9J3 1734 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Spocd1B1ASB6 936 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Stxbp3Q60770 592 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 WaplQ65Z40 1200 aaKnown RBP17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Me3Q8BMF3 604 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Tfap4Q9JIZ5 338 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sik3Q6P4S6 1311 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gm38392E9Q2A2 434 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Tdo2P48776 406 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Madcam1Q61826 405 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Drc7Q6V3W6 876 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Commd10Q8JZY2 202 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Acot9Q9R0X4 439 aaKnown RBP17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Cabp5Q9JLK3 173 aa17.44■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gja5Q01231 358 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Dmrtc1Q9D9R7 182 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Eepd1Q3TGW2 569 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Wdr70Q3TWF6 657 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Mapk4Q6P5G0 583 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Kiaa1524Q8BWY9 907 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Pus7lQ8CE46 702 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ttll1Q91V51 423 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Usp17lbE9Q9U0 468 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 GmpsQ3THK7 693 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Slc44a1Q6X893 653 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Nod2Q8K3Z0 1020 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ccnt1Q9QWV9 724 aaKnown RBP17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Mon2Q80TL7 1715 aa17.43■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gm3893E9Q1I1 302 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 LdhbP16125 334 aaKnown RBP17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Usp50Q6P8X6 390 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ube3cQ80U95 1083 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Wdr33Q8K4P0 1330 aaKnown RBP17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Plekhg6Q8R0J1 787 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Dpf1Q9QX66 387 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sipa1l1Q8C0T5 1782 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Mcm4P49717 862 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ube2hP62257 183 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Fam102bQ8BQS4 339 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gm20425E9Q035 978 aaKnown RBP17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 SrprbP47758 269 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Kifap3P70188 793 aa17.42■□□□□ 0.38
Upf1-202ENSMUST00000215817 Alppl2P24823 529 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Pde6aP27664 859 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Mrpl50Q8VDT9 159 aaKnown RBP17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ndufa8Q9DCJ5 172 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Cap1P40124 474 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Lrrfip1Q3UZ39 729 aaKnown RBP17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sulf1Q8K007 870 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sept2P42208 361 aaKnown RBP17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Zfp341Q6PGC9 846 aa17.41■□□□□ 0.38
Upf1-202ENSMUST00000215817 Snap25P60879 206 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Lgr5Q9Z1P4 907 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Als2Q920R0 1651 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Mum1l1Q4VA55 681 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Ctr9Q62018 1173 aaKnown RBP17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Zmynd15Q8C0R7 736 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Bcs1lQ9CZP5 418 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Zbtb39Q6PDK0 712 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gjd4Q8BSD4 364 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Atxn7Q8R4I1 867 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 1700003F12RikA2AKE5 210 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 EzrP26040 586 aaKnown RBP17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Fhdc1Q3ULZ2 1149 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sfi1Q3UZY0 1216 aaKnown RBP17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Sept12Q9D451 317 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Olr1Q9EQ09 363 aa17.4■□□□□ 0.38
Upf1-202ENSMUST00000215817 Gm45015A0A140LII9 184 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Gm18336A0A140LIU8 765 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ppp2r5bQ6PD28 497 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 BaatQ91X34 420 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Prss40A6H6T1 365 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Prkab1Q9R078 270 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Pex1Q5BL07 1284 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Edrf1Q6GQV7 1239 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Kdm4cQ8VCD7 1054 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Brms1Q99N20 246 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Akap8Q9DBR0 687 aaKnown RBP17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Nlrx1Q3TL44 975 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Osbpl2Q8BX94 484 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Krt79Q8VED5 531 aa17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Mrps5Q99N87 432 aaKnown RBP17.39■□□□□ 0.37
Upf1-202ENSMUST00000215817 Fbxo11Q7TPD1 930 aaKnown RBP17.38■□□□□ 0.37
Upf1-202ENSMUST00000215817 Ireb2Q811J3 963 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms