RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 Tpd52Q62393 224 aa11.14□□□□□ -0.63
Smchd1-201ENSMUST00000127430 ZgpatQ8VDM1 511 aa11.14□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Rad23aP54726 363 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 NostrinQ6WKZ7 506 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc113Q8C5T8 377 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Dzip1lQ499E4 774 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ckap2lQ7TS74 745 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 AqrQ8CFQ3 1481 aaKnown RBP11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Bcap29Q61334 240 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Naa30Q8CES0 364 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Armcx6Q8K3A6 301 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Psma7Q9Z2U0 248 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cyp7a1Q64505 503 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cdc23Q8BGZ4 597 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Wdr24Q8CFJ9 790 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Lrrc2Q8VDB8 371 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Erbb3Q61526 1339 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Speer2E9Q9U2 264 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cetn3O35648 167 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Krt13P08730 437 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Gna11P21278 359 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 MycbpapQ5SUV2 932 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Nup58Q8R332 587 aa11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Tor1aip1Q921T2 595 aaKnown RBP11.13□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Enc1O35709 589 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 PhexP70669 749 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ddx54Q8K4L0 874 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Klc4Q9DBS5 619 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Trpc3Q9QZC1 836 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Rab11fip4Q8BQP8 635 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Rint1Q8BZ36 792 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Stac3Q8BZ71 360 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Gdap1l1Q8VE33 370 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Sh2b1Q91ZM2 756 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 RarsQ9D0I9 660 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Lmnb1P14733 588 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 PparaP23204 468 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Gas2l2Q5SSG4 860 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Retreg2Q6NS82 541 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Prr18Q6PAN7 307 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc85bQ6PDY0 202 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Rsad2Q8CBB9 362 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 MthfsQ9D110 203 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Speer4f2E9Q366 295 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 PrphP15331 475 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Trappc10Q3TLI0 1259 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Pabpn1Q8CCS6 302 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 PogzQ8BZH4 1409 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 InsrP15208 1372 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Tcp1P11983 556 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Zfp781Q0P5U5 243 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Spats2lQ91WJ7 558 aaKnown RBP11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cdk5rap3Q99LM2 503 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Krt20Q9D312 431 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Myo1cQ9WTI7 1063 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Caskin1Q6P9K8 1431 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Gm10110D3Z5M2 615 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Acbd5Q5XG73 508 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 PrimpolQ6P1E7 537 aa11.12□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Nsd3Q6P2L6 1439 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Dync1i2O88487 612 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Krt19P19001 403 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Pde4dQ01063 747 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Tpp2Q64514 1262 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc40Q8BI79 1192 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc103Q9D9P2 237 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Gm29094F6Q785 221 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Mybl1P51960 751 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc129Q14B48 1034 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Kank4Q6P9J5 1016 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cep104Q80V31 926 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Nucks1Q80XU3 234 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Jmjd4Q8BFT6 427 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Tpcn2Q8BWC0 731 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Bicc1Q99MQ1 977 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc124Q9D8X2 217 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Chmp6P0C0A3 200 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cct6aP80317 531 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 9230110C19RikQ8CC70 267 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cabp5Q9JLK3 173 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ccdc110Q3V125 848 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Tsr1Q5SWD9 803 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cnot10Q8BH15 744 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ptcd1Q8C2E4 695 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Kif2cQ922S8 721 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Cd274Q9EP73 290 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Coq7P97478 217 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Dzip1Q8BMD2 852 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Lonp1Q8CGK3 949 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 LzicQ8K3C3 190 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Thoc1Q8R3N6 657 aaKnown RBP11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Taf7Q9R1C0 341 aa11.11□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Psmc1P62192 440 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Slc26a7Q8R2Z3 656 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 SufuQ9Z0P7 484 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Lrrc74aA0A1Y7VMD6 494 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 HdxQ14B70 692 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Ppp2r5eQ61151 467 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 NelfbQ8C4Y3 580 aa11.1□□□□□ -0.63
Smchd1-201ENSMUST00000127430 Pcdhb22Q91XZ8 794 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms