RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Vps54Q5SPW0 977 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Scfd2Q8BTY8 684 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Lmod1Q8BVA4 595 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Rbm28Q8CGC6 750 aaKnown RBP11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Dlk2Q8K1E3 382 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Iffo2Q8R2V2 512 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 IcoslgQ9JHJ8 322 aa11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 SktA2AQ25 1946 aaKnown RBP11.18□□□□□ -0.62
Ssr3-202ENSMUST00000119896 NesQ6P5H2 1864 aaKnown RBP11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pnpla6Q3TRM4 1355 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 LtkP08923 888 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cyp2c39P56656 490 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Sema3eP70275 775 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Samd11Q1RNF8 542 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Kmt2eQ3UG20 1868 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Mrgprb1Q3UG61 350 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Kiaa1211Q5PR69 1207 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Cyp26b1Q811W2 512 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Stac3Q8BZ71 360 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 IrgqQ8VIM9 583 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Vta1Q9CR26 309 aa11.17□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Myh6Q02566 1938 aaKnown RBP11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Sbf1Q6ZPE2 1867 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Rexo5D3YW29 759 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pnmal2G3X9N3 661 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Gjd2O54851 321 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Slc6a20bO88575 635 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Fscn2Q32M02 492 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Brip1Q5SXJ3 1174 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 ZyxQ62523 564 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Tbc1d10bQ8BHL3 798 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Olfm5Q8BU90 496 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Dpp9Q8BVG4 862 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Pcgf6Q99NA9 353 aa11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Usp14Q9JMA1 493 aaKnown RBP11.16□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Mcmdc2E9Q956 681 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Il7P10168 154 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Zfp957Q3UT76 567 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Prpf38aQ4FK66 312 aaKnown RBP11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ppm1gQ61074 542 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Edrf1Q6GQV7 1239 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Alpk1Q9CXB8 1231 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Ppil4Q9CXG3 492 aaKnown RBP11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Nphp1Q9QY53 687 aa11.15□□□□□ -0.62
Ssr3-202ENSMUST00000119896 Myh14Q6URW6 2000 aa11.15□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Rad50P70388 1312 aa11.15□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Kiaa0100Q5SYL3 2234 aa11.15□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Gml2G5E8L7 176 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Gm3138K7N754 218 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Pitpnm1O35954 1243 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Fgfr2P21803 821 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Sf3a1Q8K4Z5 791 aaKnown RBP11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Slc18a1Q8R090 521 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Srgap1Q91Z69 1062 aa11.14□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Wfdc16A2A5H4 111 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Pramef17A2ASJ1 475 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Fam186bD3Z420 943 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 AoahO35298 574 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Trim58Q5NCC9 485 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Fam13aQ8BGI4 693 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Golim4Q8BXA1 655 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Pqbp1Q91VJ5 263 aaKnown RBP11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 HlcsQ920N2 722 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Ctu1Q99J10 420 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Bco2Q99NF1 532 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Col2a1P28481 1487 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Myh2G3UW82 1942 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Aox3G3X982 1335 aa11.13□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Celf5D3Z4T1 395 aaKnown RBP11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 G430095P16RikE9Q913 147 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Parp2O88554 559 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Sept2P42208 361 aaKnown RBP11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Ccdc85aQ5SP85 500 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Il17raQ60943 864 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Ddx4Q61496 702 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Adgra1Q8C4G9 578 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 E4f1Q8CCE9 783 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 HibadhQ99L13 335 aaKnown RBP11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Eif2s2Q99L45 331 aaKnown RBP11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Pdcd6ipQ9WU78 869 aaKnown RBP11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Klrc1Q9Z202 244 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Fkbp1bQ9Z2I2 108 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Kntc1Q8C3Y4 2207 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Vmn2r68L7N2B3 851 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Bnip3O55003 187 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 DcxO88809 366 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 VrtnQ3SYK4 740 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Esyt3Q5DTI8 891 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Tpd52Q62393 224 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Tdrd1Q99MV1 1172 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Ak7Q9D2H2 614 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Tmod4Q9JLH8 345 aa11.12□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Ncor1Q60974 2453 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 StamP70297 548 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Atp11aP98197 1187 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Il6stQ00560 917 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 HmgcrQ01237 887 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Abcb7Q61102 752 aaKnown RBP11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 GlmnQ8BZM1 596 aa11.11□□□□□ -0.63
Ssr3-202ENSMUST00000119896 Bclaf1Q8K019 919 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms