RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Hnrnph1O35737 449 aaKnown RBP9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Myo1aO88329 1043 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 RalylQ8BTF8 293 aa9.93□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ehbp1l1Q99MS7 1716 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Atp10bB1AWN4 1474 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tex13c2A0A0G2JGA3 530 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Akap2O54931 893 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Eif6O55135 245 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Rad23aP54726 363 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Kri1Q8VDQ9 704 aaKnown RBP9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 SncbQ91ZZ3 133 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gtf2iQ9ESZ8 998 aaKnown RBP9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gkap1Q9JMB0 366 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Chrm1P12657 460 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gm21985Q6P6P5 1106 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 ImmtQ8CAQ8 757 aaKnown RBP9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Eif2ak3Q9Z2B5 1114 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 TnksQ6PFX9 1320 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 A0A1W2P7S8 802 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gm5624F6ZZG8 207 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 TsksO54887 585 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ift88Q61371 824 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cdc5lQ6A068 802 aaKnown RBP9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Luc7l2Q7TNC4 392 aaKnown RBP9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tmod2Q9JKK7 351 aa9.92□□□□□ -0.82
Col28a1-201ENSMUST00000115537 GakQ99KY4 1305 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gm28510A0A087WP28 240 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 LtkP08923 888 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Prkg1P0C605 671 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Surf6P70279 355 aaKnown RBP9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Nlrp9aQ66X03 949 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Jade2Q6ZQF7 829 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Anapc4Q91W96 807 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 MaddQ80U28 1577 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Plekhg2Q6KAU7 1340 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Igsf1Q7TQA1 1317 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cyp2c69E9PXC3 491 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Stx8O88983 236 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cyp2c40P56657 491 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Capza3P70190 299 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Terf2ipQ91VL8 393 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Trim11Q99PQ2 467 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Mrps25Q9D125 171 aaKnown RBP9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Uchl5Q9WUP7 329 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Msh6P54276 1358 aaKnown RBP9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Topaz1E5FYH1 1653 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Vsnl1P62761 191 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Hnrnph2P70333 449 aaKnown RBP9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cep131Q62036 1060 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Matr3Q8K310 846 aaKnown RBP9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Klhl40Q9D783 621 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Egfl6Q9JJZ5 550 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Mdc1Q5PSV9 1707 aa9.91□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sem1P60897 70 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Pfkfb1P70266 471 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Sh3gl3Q62421 347 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Tsga10Q6NY15 697 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 PrimpolQ6P1E7 537 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gpt2Q8BGT5 522 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ift74Q8BKE9 600 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 BrapQ99MP8 591 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Kif13aQ9EQW7 1749 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Zbtb21E9Q444 1094 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Slc4a4O88343 1079 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 LbrQ3U9G9 626 aaKnown RBP9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 NntQ61941 1086 aaKnown RBP9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Usp27Q8CEG8 438 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Fbxo18Q8K2I9 1042 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Pdcd6ipQ9WU78 869 aaKnown RBP9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gja10Q9WUS4 505 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Cps1Q8C196 1500 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Gpr182P43142 395 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 NeblQ0II04 452 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Spata18Q0P557 537 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 SdsQ8VBT2 327 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Hps3Q91VB4 1002 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Rnaseh2aQ9CWY8 301 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Usp21Q9QZL6 566 aa9.9□□□□□ -0.82
Col28a1-201ENSMUST00000115537 Ces1hD3Z298 562 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 C2cd2E9Q3C1 696 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Enc1O35709 589 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Kcnd1Q03719 651 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Q32P12 615 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Zmym1Q3TJB1 983 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Fam198bQ3UPI1 517 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Krt39Q6IFX4 482 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Lmbrd2Q8C561 694 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Lrrfip2Q91WK0 415 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Tgs1Q923W1 853 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Galntl5Q9D4M9 431 aa9.9□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Rimbp3Q3V0F0 1606 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 PplQ9R269 1755 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Fam83bQ0VBM2 1012 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 4930504O13RikQ8C5Z9 145 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Arhgef6Q8K4I3 771 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 DccP70211 1447 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Eftud2O08810 971 aaKnown RBP9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Ppp1r1bQ60829 194 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Iqcb1Q8BP00 598 aa9.89□□□□□ -0.83
Col28a1-201ENSMUST00000115537 Iws1Q8C1D8 766 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms