RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Klc4Q9DBS5 619 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Il1rapl2Q9ERS6 686 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Abt1Q9QYL7 269 aaKnown RBP20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 GckP52792 465 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Prune1Q8BIW1 454 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Crybg2B7ZCC2 1516 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gja8P28236 440 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Vat1lQ80TB8 417 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Stac3Q8BZ71 360 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Card10P58660 1021 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Nlrp2Q4PLS0 1046 aaKnown RBP20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Krt72Q6IME9 520 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 HltfQ6PCN7 1003 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tbc1d2B1AVH7 922 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Cacna2d2Q6PHS9 1154 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Xrcc4Q924T3 326 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Arhgef1Q61210 920 aaKnown RBP20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ddx54Q8K4L0 874 aaKnown RBP20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Tdrd9Q14BI7 1383 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Deaf1Q9Z1T5 566 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Map2k2Q63932 401 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Rps6ka1P18653 724 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Atp2b3Q0VF55 1220 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Inf2Q0GNC1 1273 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Krt14Q61781 484 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Slc5a1Q8C3K6 665 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Krt5Q922U2 580 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Nde1Q9CZA6 344 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 ChmQ9QXG2 665 aa20.2■□□□□ 0.82
Trim71-201ENSMUST00000111816 Gngt2Q61017 69 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Bcar3Q9QZK2 820 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Kif23E9Q5G3 953 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Chpf2Q3UU43 768 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Hand2Q61039 217 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Klc3Q91W40 508 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Q9CR55 154 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Znf568E9PYI1 671 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Iqsec3Q3TES0 1195 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Map7d3A2AEY4 876 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 ByslO54825 436 aaKnown RBP20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 RasefQ5RI75 627 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Grk2Q99MK8 689 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Gnl3Q8CI11 538 aaKnown RBP20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Sept2P42208 361 aaKnown RBP20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ano9P86044 747 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Cyp7a1Q64505 503 aa20.19■□□□□ 0.82
Trim71-201ENSMUST00000111816 Kpna2P52293 529 aaKnown RBP20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 E4f1Q8CCE9 783 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Vps37bQ8R0J7 285 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Phldb3E9QAF4 648 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Krt25Q8VCW2 446 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 EprsQ8CGC7 1512 aaKnown RBP20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Gm6121L7MUF1 212 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ubn1Q4G0F8 1135 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Rab3ipQ68EF0 428 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Xbp1O35426 267 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ccdc125Q5U465 500 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Dzip3Q7TPV2 1204 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ppme1Q8BVQ5 386 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Apol11aE9PZG0 334 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Pde11aP0C1Q2 933 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 1700017N19RikA0A087WPJ1 469 aa20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Khdrbs1Q60749 443 aaKnown RBP20.18■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ano1Q8BHY3 960 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Hgh1Q8C3I8 393 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Sun1Q9D666 913 aaKnown RBP20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Hspa1lP16627 641 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Lmntd2Q0VET5 664 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Gucy2fQ5SDA5 1108 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Irf9Q61179 399 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 PaskQ8CEE6 1383 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Gucy1b3O54865 620 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ap1s3Q7TN05 154 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 NapaQ9DB05 295 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ccdc62E9PVD1 701 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Bub1bQ9Z1S0 1052 aa20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Esyt1Q3U7R1 1092 aaKnown RBP20.17■□□□□ 0.82
Trim71-201ENSMUST00000111816 Sec23ipQ6NZC7 998 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Lrrc8cQ8R502 803 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Smarca2Q6DIC0 1577 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Kcnk16G5E845 292 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 YwhaeP62259 255 aaKnown RBP20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Hdac4Q6NZM9 1076 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 4930449I24RikQ9D5E3 319 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Card14Q99KF0 999 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 CaluO35887 315 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Frmd4bQ920B0 1035 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ino80bQ99PT3 375 aaKnown RBP20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Fam160b2Q80YR2 744 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Ccdc182Q9D9C6 152 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Flot2Q60634 428 aaKnown RBP20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Plekhg5Q66T02 1073 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Rnf10Q3UIW5 804 aa20.16■□□□□ 0.82
Trim71-201ENSMUST00000111816 Tmem60Q8K174 133 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 SufuQ9Z0P7 484 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Trpc1Q61056 793 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 MgarpQ8VI64 283 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Sytl1Q99N80 567 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Cib4Q9D9N5 185 aa20.15■□□□□ 0.82
Trim71-201ENSMUST00000111816 Myh7Q91Z83 1935 aa20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms