RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Grin2dQ03391 1323 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Golgb1E9PVZ8 3238 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Cyp3a59D3Z2W7 503 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Metap2O08663 478 aaKnown RBP20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Fam83bQ0VBM2 1012 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Prkag3Q8BGM7 489 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Elf2Q9JHC9 593 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Rcan1Q9JHG6 198 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 Nek3Q9R0A5 511 aa20.96■□□□□ 0.95
Trim47-202ENSMUST00000106441 D830030K20RikE9PYQ5 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm3043K7N693 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm16440K7N6G6 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm2244L7N2A3 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm3278L7N2D2 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm8271L7N2E2 218 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 FktnQ8R507 461 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Trap1aP19473 224 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Kcnj4P52189 445 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Ube3cQ80U95 1083 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Dnm3Q8BZ98 863 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Tmem132aQ922P8 1018 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Zbtb43Q9DAI4 467 aa20.95■□□□□ 0.94
Trim47-202ENSMUST00000106441 Cyp26a1O55127 497 aa20.94■□□□□ 0.94
Trim47-202ENSMUST00000106441 Epb41l2O70318 988 aaKnown RBP20.94■□□□□ 0.94
Trim47-202ENSMUST00000106441 Terf1P70371 421 aa20.94■□□□□ 0.94
Trim47-202ENSMUST00000106441 Spata32Q8C5V0 334 aa20.94■□□□□ 0.94
Trim47-202ENSMUST00000106441 Trmt44Q9D2Q2 713 aa20.94■□□□□ 0.94
Trim47-202ENSMUST00000106441 Pcdhb9E9Q5G2 828 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Me1P06801 572 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Pla2g4fQ50L41 855 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Vps37dQ810I0 261 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 AatfQ9JKX4 526 aaKnown RBP20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 GmnnO88513 206 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Dpf2Q61103 391 aaKnown RBP20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Ktn1Q61595 1327 aaKnown RBP20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 VmacQ8BP01 174 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Bola3Q8CEI1 110 aa20.93■□□□□ 0.94
Trim47-202ENSMUST00000106441 Col5a2Q3U962 1497 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Med23Q80YQ2 1367 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Stat5bP42232 786 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Edrf1Q6GQV7 1239 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Pcdhb14Q6PB90 796 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Spag5Q7TME2 1165 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Acnat2Q8BGG9 420 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Sec62Q8BU14 398 aaKnown RBP20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Evc2Q8K1G2 1220 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Krt84Q99M73 603 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Tuft1O08970 390 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 Washc4Q3UMB9 1173 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 RarsQ9D0I9 660 aaKnown RBP20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 FliiQ9JJ28 1271 aa20.92■□□□□ 0.94
Trim47-202ENSMUST00000106441 NsmfQ99NF2 532 aa20.91■□□□□ 0.94
Trim47-202ENSMUST00000106441 Mtmr2Q9Z2D1 643 aa20.91■□□□□ 0.94
Trim47-202ENSMUST00000106441 Lipo1J3QME6 396 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Kifc2O08672 792 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Casp12O08736 419 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 H2afxP27661 143 aaKnown RBP20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Epha2Q03145 977 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Pcdhgc5Q91XW9 944 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Usp17lbE9Q9U0 468 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Dapk3O54784 448 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Pde6aP27664 859 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Foxp1P58462 705 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Znf18Q810A1 556 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Slc44a4Q91VA1 707 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Large1Q9Z1M7 756 aa20.9■□□□□ 0.94
Trim47-202ENSMUST00000106441 Slc1a4O35874 532 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Cyp2d9P11714 504 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Dnm1P39053 867 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gas2l3Q3UWW6 683 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Kif22Q3V300 660 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Usp13Q5BKP2 858 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Tcp11l1Q8BTG3 509 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Ccdc150Q8CDI7 1110 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Gm11983V9GXS8 105 aa20.89■□□□□ 0.94
Trim47-202ENSMUST00000106441 Eddm13E9Q7F5 164 aa20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 Myo1aO88329 1043 aa20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 DymQ8CHY3 669 aa20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 Frat2Q8K025 231 aa20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ddx27Q921N6 760 aaKnown RBP20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 Gtf2iQ9ESZ8 998 aaKnown RBP20.89■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ampd3O08739 766 aa20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 L1td1Q587J6 782 aaKnown RBP20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 Prpf4bQ61136 1007 aaKnown RBP20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 Mei4Q8BRM6 389 aa20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 Etf1Q8BWY3 437 aaKnown RBP20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 Wasf1Q8R5H6 559 aa20.88■□□□□ 0.93
Trim47-202ENSMUST00000106441 Cyp2c68K7N6C2 491 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Serpinb6bO08804 377 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Samsn1P57725 372 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Nell2Q61220 819 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Phf20l1Q8CCJ9 1013 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Trim11Q99PQ2 467 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Psme4Q5SSW2 1843 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Nbr1P97432 988 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Map3k9Q3U1V8 1077 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Arhgef16Q3U5C8 713 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Arglu1Q3UL36 271 aaKnown RBP20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Ckap2Q3V1H1 664 aa20.87■□□□□ 0.93
Trim47-202ENSMUST00000106441 Prdm1Q60636 856 aa20.87■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms