RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Nod2Q8K3Z0 1020 aa16.73■□□□□ 0.27
Chd3-201ENSMUST00000092971 Vti1aO89116 217 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 PhexP70669 749 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 PdclQ9DBX2 301 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Gm3415J3QMS8 315 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Naa35Q6PHQ8 725 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Cracr2bQ80ZJ8 394 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Msantd4Q91YU3 345 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Gm3404Q9D506 307 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Crybg2B7ZCC2 1516 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Lrrc23O35125 340 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Ddx39aQ8VDW0 427 aaKnown RBP16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Nop2Q922K7 793 aaKnown RBP16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Mast3Q3U214 1321 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Ccdc162pQ0VG85 912 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Prr18Q6PAN7 307 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Ppfia2Q8BSS9 1257 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Naa30Q8CES0 364 aa16.72■□□□□ 0.27
Chd3-201ENSMUST00000092971 Naip2Q9QUK4 1447 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Rsph10bE9PYQ0 876 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Timm44O35857 452 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Tubb5P99024 444 aaKnown RBP16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Slc51bQ80WK2 128 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Fndc3aQ8BX90 1198 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 ByslO54825 436 aaKnown RBP16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Prl7a2O54831 253 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Zfp781Q0P5U5 243 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Q3TYL0 343 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Cnga4Q3UW12 575 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Pagr1aQ99L02 253 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 MlxiplQ99MZ3 864 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 AatfQ9JKX4 526 aaKnown RBP16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Slc27a3O88561 667 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 AdkP55264 361 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Gm1043A0A140LJC2 1431 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Gm28047Q3US59 414 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Elf1Q60775 612 aa16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Zmym4A2A791 1549 aaKnown RBP16.71■□□□□ 0.27
Chd3-201ENSMUST00000092971 Pagr1bF6V0H0 108 aa16.71■□□□□ 0.26
Chd3-201ENSMUST00000092971 Atp6v1aP50516 617 aaKnown RBP16.71■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ccdc175E9PVB3 822 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 ClgnP52194 611 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Gucy2eP52785 1108 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Madcam1Q61826 405 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Cdk5rap3Q99LM2 503 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 4930548H24RikQ9D496 437 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Mtss1lQ6P9S0 715 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Tex2Q6ZPJ0 1128 aaKnown RBP16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Slc4a7Q8BTY2 1034 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Trim32Q8CH72 655 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Znf467Q8JZL0 594 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Smc6Q924W5 1097 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 CactinQ9CS00 772 aaKnown RBP16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Fam133bQ9CVI2 245 aaKnown RBP16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 GlyctkQ8QZY2 523 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Naa16Q9DBB4 864 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Gucy2fQ5SDA5 1108 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Tbc1d31Q6NXY1 996 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 B4galnt4Q766D5 1034 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Dnajc10Q9DC23 793 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Cyth1Q9QX11 398 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Pde3aQ9Z0X4 1141 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Krt27Q9Z320 448 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Gm11985A0A1B0GS61 206 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Adcy8P97490 1249 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Rnf40Q3U319 1001 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Parp10Q8CIE4 960 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Stag1Q9D3E6 1258 aa16.7■□□□□ 0.26
Chd3-201ENSMUST00000092971 Anxa1P10107 346 aaKnown RBP16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Rassf10Q8BL43 508 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Spata2Q8K004 515 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Zkscan5Q9Z1D8 819 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ano3A2AHL1 981 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Zscan25B2RX31 543 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Dzip3Q7TPV2 1204 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Edc3Q8K2D3 508 aaKnown RBP16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 RtcbQ99LF4 505 aaKnown RBP16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Iqgap2Q3UQ44 1575 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Gngt2Q61017 69 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Saal1Q9D2C2 474 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Lonrf2B2RT44 518 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ifit1Q64282 463 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Krt9Q6RHW0 743 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 C130026I21RikQ8C898 291 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Irx4Q9QY61 515 aa16.69■□□□□ 0.26
Chd3-201ENSMUST00000092971 Stmn1P54227 149 aaKnown RBP16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 VrtnQ3SYK4 740 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Yipf3Q3UDR8 347 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 ThrspQ62264 150 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Dhx38Q80X98 1228 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Kif9Q9WV04 790 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Pnma5Q5DTT8 618 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Fam163aQ8CAA5 168 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Cabp7Q91ZM8 215 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Cops6O88545 324 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ddb1Q3U1J4 1140 aaKnown RBP16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Dnajc17Q91WT4 303 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Dach1Q9QYB2 751 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ppip5k1A2ARP1 1436 aa16.68■□□□□ 0.26
Chd3-201ENSMUST00000092971 Ets1P27577 440 aa16.68■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms