RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Stk39Q9Z1W9 556 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Mroh6V9GX81 722 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cyp4x1Q6A152 507 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Wasf1Q8R5H6 559 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Thap2Q9D305 217 aa13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rai14Q9EP71 979 aaKnown RBP13.15□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Exoc3l2D3YUP5 789 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mapkapk5O54992 473 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Evi5P97366 809 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 ErmnQ5EBJ4 281 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Znf496Q5SXI5 585 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Nab2Q61127 525 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mrps31Q61733 384 aaKnown RBP13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tshz2Q68FE9 1030 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Snd1Q78PY7 910 aaKnown RBP13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Map3k11Q80XI6 850 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Znf526Q8BI66 675 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tktl2Q9D4D4 627 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Kcnq5Q9JK45 933 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Crb1Q8VHS2 1405 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Myo1aO88329 1043 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Sox5P35710 763 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 TbcaP48428 108 aaKnown RBP13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Eva1cP58659 440 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Fam89aQ14BJ1 175 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Abtb2Q7TQI7 1024 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Olfr119Q7TRJ5 321 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Sept9Q80UG5 583 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ttc12Q8BW49 704 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ubac1Q8VDI7 409 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tbc1d8bA3KGB4 1114 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Acad12D3Z7X0 555 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Casp12O08736 419 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Pde11aP0C1Q2 933 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 PparaP23204 468 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Rad23aP54726 363 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Dynll1P63168 89 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Fam83bQ0VBM2 1012 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slc27a1Q60714 646 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 TxlnaQ6PAM1 554 aaKnown RBP13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Caps2Q8BUG5 550 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Lrrd1Q8C0R9 853 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tspyl4Q8VD63 406 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Pcdha7Q91Y13 937 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Plekho1Q9JIY0 408 aa13.14□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Col3a1P08121 1464 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gcom1E9PZ54 550 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Wnt7aP24383 349 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 MyzapQ3UIJ9 466 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Hps6Q8BLY7 805 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cep85Q8BMK0 761 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Nod2Q8K3Z0 1020 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Rsrc2A2RTL5 376 aaKnown RBP13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gm21969J3QJZ1 289 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slurp2P0DP59 97 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Jakmip3Q5DTN8 844 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cdcp1Q5U462 833 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slc39a11Q8BWY7 342 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Foxo4Q9WVH3 505 aa13.13□□□□□ -0.31
Col9a1-202ENSMUST00000088349 A0A1Y7VML8 143 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Epb41l2O70318 988 aaKnown RBP13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mdh1P14152 334 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Gucy2cQ3UWA6 1072 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ube3cQ80U95 1083 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Iqcb1Q8BP00 598 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ndufb9Q9CQJ8 179 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Krtap5-3Q9D226 196 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Abca15E9PWH4 1668 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 CltaO08585 235 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Traf1P39428 409 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Klc3Q91W40 508 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mis18aQ9CZJ6 204 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Hip1rQ9JKY5 1068 aa13.12□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tbc1d5Q80XQ2 815 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Terb1Q8C0V1 768 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Efcab8Q8C9R9 203 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ano2Q8CFW1 1002 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Bicdl2Q8CHW5 507 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Mylk2Q8VCR8 613 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ybx3Q9JKB3 361 aaKnown RBP13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Nmt2O70311 529 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cnnm2Q3TWN3 875 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ddb1Q3U1J4 1140 aaKnown RBP13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cyp24a1Q64441 514 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 RragbQ6NTA4 374 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slc44a1Q6X893 653 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 LarsQ8BMJ2 1178 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slc5a4bQ91ZP4 660 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Cbx8Q9QXV1 362 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Tnks1bp1P58871 1720 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Dennd3A2RT67 1274 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ugt1a8D3Z748 530 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ugt1a10E9PXN7 530 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Plcb3P51432 1234 aaKnown RBP13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 LbrQ3U9G9 626 aaKnown RBP13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ell2Q3UKU1 639 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Anks1bQ8BIZ1 1259 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Slx1bQ8BX32 270 aa13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Ppfibp1Q8C8U0 969 aaKnown RBP13.11□□□□□ -0.31
Col9a1-202ENSMUST00000088349 Apobec3Q99J72 440 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms