RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Timm44O35857 452 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Dync1i2O88487 612 aaKnown RBP17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Q3TYL0 343 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lonrf3Q9D4H7 753 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Trip13Q3UA06 432 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Mettl5Q8K1A0 209 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Abhd8Q8R0P8 439 aa17.31■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Zfp781Q0P5U5 243 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 RragaQ80X95 313 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Thap12Q9CUX1 758 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Med10Q9CXU0 135 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Xrcc6P23475 608 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Slc4a7Q8BTY2 1034 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Cabs1Q8C633 391 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Xrcc4Q924T3 326 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 HnrnpcQ9Z204 313 aaKnown RBP17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 IntuQ059U7 942 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Scyl1Q9EQC5 806 aaKnown RBP17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Cyth1Q9QX11 398 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gnat2P50149 354 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Dmrt2Q8BG36 561 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Kat6aQ8BZ21 2003 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Svs3aF2Z472 265 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lrp2bpQ9D4C6 346 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 RpsaP14206 295 aaKnown RBP17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 RcvrnP34057 202 aa17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Surf6P70279 355 aaKnown RBP17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Wdr46Q9Z0H1 622 aaKnown RBP17.3■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Vps54Q5SPW0 977 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ufl1Q8CCJ3 793 aaKnown RBP17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gm45015A0A140LII9 184 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rbm17Q8JZX4 405 aaKnown RBP17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gm4758L7N258 96 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lonp1Q8CGK3 949 aaKnown RBP17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rhobtb1Q9DAK3 695 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Abt1Q9QYL7 269 aaKnown RBP17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ier5O89113 308 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Faf1P54731 649 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ubn1Q4G0F8 1135 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Cage1Q5IR70 849 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ifih1Q8R5F7 1025 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 SyncQ9EPM5 470 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Senp1P59110 640 aa17.29■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rab34Q64008 259 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 ScocQ78YZ6 125 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Fam180aQ8BR21 173 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Tbx22Q8K402 517 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ndc80Q9D0F1 642 aaKnown RBP17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ap1b1O35643 943 aaKnown RBP17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 LgsnQ8CIX8 563 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Galnt15Q9D2N8 638 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Retreg2Q6NS82 541 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Daam2Q80U19 1115 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Msantd4Q91YU3 345 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rnf14Q9JI90 485 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Ccnt1Q9QWV9 724 aaKnown RBP17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Diaph3Q9Z207 1171 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lonrf2B2RT44 518 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Bin2D3Z6Q9 489 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 MafgO54790 162 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Sh2b1Q91ZM2 756 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Zcchc17Q9ESX4 241 aaKnown RBP17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 MthfslL7N466 203 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Foxd4Q60688 444 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Lrrc8aQ80WG5 810 aa17.28■□□□□ 0.36
Ubr3-201ENSMUST00000055758 C130026I21RikQ8C898 291 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Atp6v0a1Q9Z1G4 839 aaKnown RBP17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 NexmifQ5DTT1 1515 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Chd5A2A8L1 1946 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gna15P30678 374 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Efcab2Q9CQ46 164 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Unc13aQ4KUS2 1712 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Gpbp1Q6NXH3 473 aaKnown RBP17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Rint1Q8BZ36 792 aa17.27■□□□□ 0.36
Ubr3-201ENSMUST00000055758 Kank4Q6P9J5 1016 aa17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 PparaP23204 468 aa17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 G3bp2P97379 482 aaKnown RBP17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Efcab14Q8BGQ6 484 aa17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Polr3cQ9D483 533 aa17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Arpp21Q9DCB4 807 aa17.27■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Zscan18E9PUD6 809 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 GckrQ91X44 587 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Ttc21bQ0HA38 1315 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 EprsQ8CGC7 1512 aaKnown RBP17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Tbc1d2B1AVH7 922 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Pdzd8B9EJ80 1147 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Samsn1P57725 372 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Ccdc154Q6RUT8 657 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Cyp27a1Q9DBG1 533 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Arhgap42B2RQE8 841 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Slc12a2P55012 1205 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Itih3Q61704 889 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Zscan25B2RX31 543 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Card6E9PWH2 1175 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Ccdc33Q3ULW6 985 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Cfap36Q8C6E0 343 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Fbxo3Q9DC63 480 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Casp2P29594 452 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Gm4981Q3ULJ8 291 aa17.26■□□□□ 0.35
Ubr3-201ENSMUST00000055758 Sp4Q62445 782 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms