RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Acap3Q6NXL5 833 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Fermt2Q8CIB5 680 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tmod4Q9JLH8 345 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Clec11aO88200 328 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nlrp9bQ66X22 1003 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ttll4Q80UG8 1193 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Serpina10Q8R121 448 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Efcc1Q9JJF6 558 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm5624F6ZZG8 207 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 LdhbP16125 334 aaKnown RBP13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gng11P61953 73 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Atp1a3Q6PIC6 1013 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Rexo1Q7TT28 1213 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cabp7Q91ZM8 215 aa13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Msh6P54276 1358 aaKnown RBP13.36□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Yars2Q8BYL4 472 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccdc12Q8R344 166 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Kif17Q99PW8 1038 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nlrp5Q9R1M5 1163 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Trim56Q80VI1 734 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 TxlnaQ6PAM1 554 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Stoml1Q8CI66 399 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Dydc1Q9D9T0 175 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 PplQ9R269 1755 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ifi207E9Q3L4 978 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccdc181Q80ZU5 509 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gm5934D3Z4U6 212 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tspyl3Q3UYP3 334 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Rrp9Q91WM3 475 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Yeats4Q9CR11 227 aaKnown RBP13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Egfl6Q9JJZ5 550 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Suclg2Q9Z2I8 433 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Znf521Q6KAS7 1311 aa13.35□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Trim30cD3YVI9 513 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cyp2d11P24457 504 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Map9Q3TRR0 646 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ctnnbl1Q9CWL8 563 aaKnown RBP13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ccdc94Q9D6J3 314 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Chmp6P0C0A3 200 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Zkscan4Q5SZT6 480 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Nme8Q715T0 586 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Tfap4Q9JIZ5 338 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Trip6Q9Z1Y4 480 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Abca14E9Q8F8 1683 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 A0A1Y7VML8 143 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Ppp1r9aH3BJD6 1292 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Pde6aP27664 859 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Gas8Q60779 478 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Dynll2Q9D0M5 89 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Dcaf17Q3TUL7 519 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Krt40Q6IFX3 439 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Eaf2Q91ZD6 262 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 LpxnQ99N69 386 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Trmt112Q9DCG9 125 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Prpf40aQ9R1C7 953 aaKnown RBP13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cpb1B2RS76 415 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Pdia4P08003 638 aaKnown RBP13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Celf1P28659 486 aaKnown RBP13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Cnpy2Q9QXT0 182 aa13.34□□□□□ -0.27
Pcif1-201ENSMUST00000041643 Zcwpw1Q6IR42 630 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Cep128Q8BI22 1102 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Nxf1Q99JX7 618 aaKnown RBP13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 XpcP51612 930 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Kifap3P70188 793 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ciapin1Q8WTY4 309 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Myoz2Q9JJW5 264 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Tbc1d9bQ5SVR0 1263 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Enox2Q8R0Z2 598 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Stk32bQ9JJX8 414 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Kif13aQ9EQW7 1749 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 MaeaQ4VC33 396 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 PrimpolQ6P1E7 537 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Slfn1Q9Z0I7 337 aa13.33□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Cyp19a1P28649 503 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pdcl2Q78Y63 240 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Spire2Q8K1S6 718 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Clic4Q9QYB1 253 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Prss51A0A286YDY8 319 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pfkfb1P70266 471 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 KhnynQ80U38 671 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Mrpl50Q8VDT9 159 aaKnown RBP13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Gpr108Q91WD0 569 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Lrp2bpQ9D4C6 346 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Chaf1aQ9QWF0 911 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Foxo4Q9WVH3 505 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pak1O88643 545 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Atp6v0a2P15920 856 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Rpl13P47963 211 aaKnown RBP13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Uso1Q9Z1Z0 959 aaKnown RBP13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ccdc42Q5SV66 316 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Slc27a1Q60714 646 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Fbxo11Q7TPD1 930 aaKnown RBP13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Vars2Q3U2A8 1060 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Sept9Q80UG5 583 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Znf526Q8BI66 675 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 MetP16056 1379 aa13.32□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Pdrg1P59048 133 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Madcam1Q61826 405 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 Ttll1Q91V51 423 aa13.31□□□□□ -0.28
Pcif1-201ENSMUST00000041643 RabggtaQ9JHK4 567 aa13.31□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms