RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Krt71Q9R0H5 524 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Erbb4Q61527 1308 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Kif21aQ9QXL2 1672 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Esco1Q69Z69 843 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ncoa5Q91W39 579 aaKnown RBP20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Fhod3Q76LL6 1578 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Exoc3Q6KAR6 755 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Mtss1lQ6P9S0 715 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cabp7Q91ZM8 215 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cib2Q9Z309 187 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Anks6Q6GQX6 883 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 SpopQ6ZWS8 374 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Nek9Q8K1R7 984 aa20.56■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Eme2Q56A04 373 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Spata16Q8C636 571 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rab44Q8CB87 725 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ccdc28aQ8CEI3 192 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Kiaa1024Q8K3V7 917 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Npc1l1Q6T3U4 1333 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Pard3Q99NH2 1333 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Dot1lQ6XZL8 1540 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Lrrc36Q3V0M2 755 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rassf10Q8BL43 508 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Kdm5aQ3UXZ9 1690 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Kdm6bQ5NCY0 1641 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 1700018F24RikB2RW27 314 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Fchsd1Q6PFY1 688 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Slc51bQ80WK2 128 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cfap57Q9D180 1249 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Nop56Q9D6Z1 580 aaKnown RBP20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Chmp6P0C0A3 200 aa20.55■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Pls1Q3V0K9 630 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Slc27a1Q60714 646 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Arl8aQ8VEH3 186 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 StrbpQ91WM1 672 aaKnown RBP20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Fam208aQ69ZR9 1610 aaKnown RBP20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Tshz1Q5DTH5 1084 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Hps3Q91VB4 1002 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Dctpp1Q9QY93 170 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Sept3Q9Z1S5 350 aa20.54■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Mknk2Q8CDB0 459 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Gpr161B2RPY5 545 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Dnm2P39054 870 aaKnown RBP20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ighmbp2P40694 993 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Slc12a2P55012 1205 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Gkap1Q9JMB0 366 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Gm44503E9PYU5 387 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Myo1aO88329 1043 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Lig3P97386 1015 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ankrd13cQ3UX43 541 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ints8Q80V86 995 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Fam217aQ9D9W6 419 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 SyncQ9EPM5 470 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ccnt1Q9QWV9 724 aaKnown RBP20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 JmyQ9QXM1 983 aa20.53■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cul7Q8VE73 1689 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 LdhaP06151 332 aaKnown RBP20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Fgd5Q80UZ0 1219 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Kif14L0N7N1 1674 aaKnown RBP20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Rbm26Q6NZN0 1012 aaKnown RBP20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Zbtb40Q6PCS8 1258 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Usp42B2RQC2 1324 aaKnown RBP20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Gm10110D3Z5M2 615 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Cbfa2t2O70374 594 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 ErmnQ5EBJ4 281 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Ifih1Q8R5F7 1025 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 PzpQ61838 1495 aa20.52■□□□□ 0.88
Ebf3-201ENSMUST00000033378 Lipo1J3QME6 396 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ano9P86044 747 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 D130040H23RikQ8BII3 405 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ints4Q8CIM8 964 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Mfap3Q922T2 349 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ttc5Q99LG4 440 aa20.52■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ncf2O70145 525 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Q66JV7 365 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Fmnl3Q6ZPF4 1028 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Miga2Q8BK03 593 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Copb1Q9JIF7 953 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tcp1P11983 556 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Eif3j1Q3UGC7 261 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Eif3j2Q66JS6 263 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 ParnQ8VDG3 624 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Surf6P70279 355 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 PicalmQ7M6Y3 660 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tas2r124Q7M718 309 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tmem119Q8R138 280 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Pus3Q9JI38 481 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Eif6O55135 245 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ctnna1P26231 906 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Aimp1P31230 310 aaKnown RBP20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Camsap3Q80VC9 1252 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ccz1Q8C1Y8 480 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Gimap7Q8R379 293 aa20.51■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Tulp4Q9JIL5 1547 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Eif2ak4Q9QZ05 1648 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Mroh9G5E8L9 891 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 DesP31001 469 aaKnown RBP20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Ccdc189Q6NZQ0 333 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Dmrt2Q8BG36 561 aa20.5■□□□□ 0.87
Ebf3-201ENSMUST00000033378 Lamc1P02468 1607 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms