RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Npy5rO70342 466 aa17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tnnt2P50752 301 aa17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Cep85Q8BMK0 761 aa17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Vps53Q8CCB4 832 aa17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Brd3Q8K2F0 726 aaKnown RBP17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Eif4enif1Q9EST3 983 aaKnown RBP17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Paxbp1P58501 919 aa17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Prpf3Q922U1 683 aaKnown RBP17.17■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Nup98Q6PFD9 1816 aaKnown RBP17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Gm43738A0A0G2JEA5 862 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Kiaa1468Q148V7 1216 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Celf1P28659 486 aaKnown RBP17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Bag1Q60739 355 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Q8BT18 775 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Mical1Q8VDP3 1048 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ddx41Q91VN6 622 aaKnown RBP17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Sf3b3Q921M3 1217 aaKnown RBP17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Dbndd1Q9CZ00 160 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Il7P10168 154 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Specc1lQ2KN98 1118 aaKnown RBP17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ankrd40Q5SUE8 363 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 MycbpapQ5SUV2 932 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tbx2Q60707 711 aa17.16■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 McamQ8R2Y2 648 aaKnown RBP17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Lmbr1Q9JIT0 490 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Aox3G3X982 1335 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 LtbrP50284 415 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Atp1b3P97370 278 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tas2r124Q7M718 309 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ppp2r2cQ8BG02 447 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Triml1Q8BVP1 470 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Nod2Q8K3Z0 1020 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tab2Q99K90 693 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 4930548H24RikQ9D496 437 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Zkscan5Q9Z1D8 819 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Kat6bQ8BRB7 1872 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Plch1Q4KWH5 1682 aa17.15■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Myh4Q5SX39 1939 aa17.14■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 1700013D24RikQ0P521 120 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Fam83bQ0VBM2 1012 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cdcp1Q5U462 833 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Letm1Q9Z2I0 738 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 A0A1W2P7S8 802 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Myo1aO88329 1043 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Adssl1P28650 457 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Rad23bP54728 416 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Eva1cP58659 440 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Traf3ip1Q149C2 625 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cdc5lQ6A068 802 aaKnown RBP17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cep128Q8BI22 1102 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Vps18Q8R307 973 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Apobec3Q99J72 440 aaKnown RBP17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Dhx30Q99PU8 1217 aaKnown RBP17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Tubb4aQ9D6F9 444 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Myh15E9Q264 1925 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 A0A1L1SQF0 893 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gjb4Q02738 266 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Sun3Q5SS91 320 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gga3Q8BMI3 718 aa17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Hexim1Q8R409 356 aaKnown RBP17.14■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Calm1P0DP26 149 aaKnown RBP17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Calm2P0DP27 149 aaKnown RBP17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Calm3P0DP28 149 aaKnown RBP17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Tdo2P48776 406 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 NsmfQ99NF2 532 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Hip1rQ9JKY5 1068 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Qtrt2B8ZXI1 415 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Anks1bQ8BIZ1 1259 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Nek9Q8K1R7 984 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Stn1Q8K2X3 378 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Tc2nQ91XT6 489 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Fer1l6E0CZ42 1862 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Myh7bA2AQP0 1941 aa17.13■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 NesQ6P5H2 1864 aaKnown RBP17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ccdc102aQ3TMW1 549 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ift88Q61371 824 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cyp2j7A0A140T8U1 504 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Eif5P59325 429 aaKnown RBP17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Plekha7Q3UIL6 1118 aaKnown RBP17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Ovgp1Q62010 721 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gm13023A2A8N2 498 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Gm21969J3QJZ1 289 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Stx8O88983 236 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Caps2Q8BUG5 550 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Nup133Q8R0G9 1155 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 1700018B08RikQ9DA83 213 aa17.12■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Cyp26c1B2RXA7 518 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 EmbP21995 330 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 MarcksP26645 309 aaKnown RBP17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Vps33bP59016 617 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Usp50Q6P8X6 390 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Dusp9Q7TNL7 452 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Necab1Q8BG18 352 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Rps6ka4Q9Z2B9 773 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 NefhP19246 1090 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Rps8P62242 208 aaKnown RBP17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 DSCC1Q14AI0 399 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Uri1Q3TLD5 531 aa17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 Sf3b2Q3UJB0 878 aaKnown RBP17.11■□□□□ 0.33
Nkx3-1-201ENSMUST00000022646 CtcfQ61164 736 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms