RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Zfp94E9Q6Y4 486 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nlrp1aQ2LKU9 1182 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rhpn1Q61085 643 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Slc26a7Q8R2Z3 656 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Krt71Q9R0H5 524 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 1700018F24RikB2RW27 314 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ptgs1P22437 602 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gna14P30677 355 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Card10P58660 1021 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tm6sf1P58749 370 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nhej1Q3KNJ2 295 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ubash3aQ3V3E1 624 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 SympkQ80X82 1284 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cnksr2Q80YA9 1032 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Armcx3Q8BHS6 379 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rassf10Q8BL43 508 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Amotl2Q8K371 772 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 4931423N10RikQ9D4J9 382 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cst12Q9DAN8 128 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rps6ka2Q9WUT3 733 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 A0A1W2P6Q8 802 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm9048A0A1W2P7H4 802 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 A0A1W2P7Z8 802 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm9046A0A1W2P855 802 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Btn2a2A4QPC6 514 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rnaseh1O70338 285 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Sult6b1P0CC03 303 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nlrx1Q3TL44 975 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pla2g4eQ50L42 875 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Apbb1ipQ8R5A3 670 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ddx41Q91VN6 622 aaKnown RBP10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Eef1gQ9D8N0 437 aaKnown RBP10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Znf335A2A5K6 1337 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Trappc8E9PWG2 1437 aa10.12□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Erbb4Q61527 1308 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 PpardP35396 440 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Myo1fP70248 1099 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ripply1Q2WG77 201 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Zbtb16Q3UQ17 673 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Mum1l1Q4VA55 681 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Anks6Q6GQX6 883 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Zmynd15Q8C0R7 736 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kif5aP33175 1027 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pa2g4P50580 394 aaKnown RBP10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Actn4P57780 912 aaKnown RBP10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 IntuQ059U7 942 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kif22Q3V300 660 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tbc1d9bQ5SVR0 1263 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Itga6Q61739 1091 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Kank4Q6P9J5 1016 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Efcc1Q9JJF6 558 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Strn3Q9ERG2 796 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Elf2Q9JHC9 593 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Mapkbp1Q6NS57 1503 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm1661E9Q963 441 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ap1b1O35643 943 aaKnown RBP10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Sorbs1Q62417 1290 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 2310002L09RikQ9D7L5 217 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Calr3Q9D9Q6 380 aa10.11□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm14685Q52KH6 695 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Esco1Q69Z69 843 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Zkscan8Q8BSL0 588 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Rbm41Q8JZV4 413 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Skint5A7XUY5 1461 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tnip3A0A1D5RMN0 279 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm14525B1AZA0 212 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm2012B1B0R1 212 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Casp8O89110 480 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tmtc1Q3UV71 942 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Fkbp3Q62446 224 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gm14819Q62478 212 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ppp6r3Q922D4 844 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Atp6v1e2Q9D593 226 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Gkap1Q9JMB0 366 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Pacsin2Q9WVE8 486 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 AW822073A0A0N4SUK1 652 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Myl3P09542 204 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Atp6v1aP50516 617 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Foxp1P58462 705 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Trappc10Q3TLI0 1259 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ccdc84Q4VA36 332 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tsr1Q5SWD9 803 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nlrp9aQ66X03 949 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 HscbQ8K3A0 234 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Klhdc4Q921I2 584 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Psmd6Q99JI4 389 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tab2Q99K90 693 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Nfil3O08750 462 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Sem1P60897 70 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Surf6P70279 355 aaKnown RBP10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Aplp1Q03157 653 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Trim21Q62191 470 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ncoa7Q6DFV7 943 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Lrrd1Q8C0R9 853 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Cabp7Q91ZM8 215 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Mrps22Q9CXW2 359 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Tmem94Q7TSH8 1360 aa10.1□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Fam81bA0A140LI28 432 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Krt36B1AQ75 473 aa10.09□□□□□ -0.79
Ccdc47-201ENSMUST00000002043 Ercc5P35689 1170 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms