RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 NbdyA0A0N4SUI7 68 aa5.61□□□□□ -1.51
Scn8a-213ENSMUST00000201549 LrbaQ9ESE1 2856 aa5.61□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Gm10382Q3V0T5 144 aa5.59□□□□□ -1.51
Scn8a-213ENSMUST00000201549 Gm10065F6TJM2 114 aa5.58□□□□□ -1.52
Scn8a-213ENSMUST00000201549 FlncQ8VHX6 2726 aaKnown RBP5.58□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Gm37013Q8K491 104 aa5.58□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Nf1Q04690 2841 aa5.57□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Itpr2Q9Z329 2701 aa5.57□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Tep1P97499 2629 aa5.57□□□□□ -1.52
Scn8a-213ENSMUST00000201549 4933415A04RikQ9D443 101 aa5.54□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Krtap10-4Q08EG8 221 aa5.54□□□□□ -1.52
Scn8a-213ENSMUST00000201549 Gm9507D3Z5T3 223 aa5.52□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Col6a5A6H584 2640 aa5.51□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Igsf10Q3V1M1 2594 aa5.5□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Gm5767A0A0J9YTU8 78 aa5.49□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Krtap13O88375 197 aa5.49□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Tex15F8VPN2 2785 aa5.49□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Krtap10-10A0A1W2P7T6 217 aa5.48□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Gm16253D3Z167 63 aa5.47□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Muc4Q8JZM8 3443 aa5.47□□□□□ -1.53
Scn8a-213ENSMUST00000201549 Rpl37Q9D823 97 aa5.46□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Krtap29-1A2A5X4 342 aa5.43□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Pdzd2E9Q1M1 2796 aa5.43□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Hivep1Q03172 2688 aa5.43□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Helz2E9QAM5 2947 aaKnown RBP5.42□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Pkd1l1Q8R526 2615 aa5.42□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Stab2Q8R4U0 2559 aa5.42□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Csmd2V9GX34 3611 aa5.42□□□□□ -1.54
Scn8a-213ENSMUST00000201549 BC029722A0A0N4SW31 51 aa5.41□□□□□ -1.54
Scn8a-213ENSMUST00000201549 OtogO55225 2910 aa5.41□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Tenm3Q9WTS6 2715 aa5.41□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Gm2310J3QNJ2 377 aa5.4□□□□□ -1.54
Scn8a-213ENSMUST00000201549 Srrm2Q8BTI8 2703 aaKnown RBP5.4□□□□□ -1.54
Scn8a-213ENSMUST00000201549 TgO08710 2766 aa5.4□□□□□ -1.55
Scn8a-213ENSMUST00000201549 2310050C09RikG5E8Z3 280 aa5.38□□□□□ -1.55
Scn8a-213ENSMUST00000201549 2310057N15RikQ9D6T8 200 aa5.38□□□□□ -1.55
Scn8a-213ENSMUST00000201549 9530053A07RikE9PVG8 2581 aa5.37□□□□□ -1.55
Scn8a-213ENSMUST00000201549 2310061N02RikQ9D6S9 174 aa5.37□□□□□ -1.55
Scn8a-213ENSMUST00000201549 Krtap14O08640 167 aa5.31□□□□□ -1.56
Scn8a-213ENSMUST00000201549 Gm9918Q8BUR5 174 aa5.3□□□□□ -1.56
Scn8a-213ENSMUST00000201549 Tnp2P11378 117 aa5.29□□□□□ -1.56
Scn8a-213ENSMUST00000201549 LystP97412 3788 aa5.27□□□□□ -1.57
Scn8a-213ENSMUST00000201549 Gm2696A0A1W2P709 240 aa5.24□□□□□ -1.57
Scn8a-213ENSMUST00000201549 Gm5965D3Z724 196 aa5.22□□□□□ -1.57
Scn8a-213ENSMUST00000201549 CubnQ9JLB4 3623 aa5.2□□□□□ -1.58
Scn8a-213ENSMUST00000201549 Tenm4Q3UHK6 2771 aa5.19□□□□□ -1.58
Scn8a-213ENSMUST00000201549 Ank2Q8C8R3 3898 aa5.17□□□□□ -1.58
Scn8a-213ENSMUST00000201549 FcgbpE9Q0B5 2583 aa5.1□□□□□ -1.59
Scn8a-213ENSMUST00000201549 D6Ertd527eA0A0N4SWI3 464 aa5.09□□□□□ -1.59
Scn8a-213ENSMUST00000201549 Fbn1Q61554 2873 aaKnown RBP5.08□□□□□ -1.6
Scn8a-213ENSMUST00000201549 Cox6b2Q80ZN9 88 aa5.07□□□□□ -1.6
Scn8a-213ENSMUST00000201549 BsnO88737 3942 aa5.07□□□□□ -1.6
Scn8a-213ENSMUST00000201549 4933428G20RikQ9D3X4 101 aa5.06□□□□□ -1.6
Scn8a-213ENSMUST00000201549 Tenm1Q9WTS4 2731 aa5.05□□□□□ -1.6
Scn8a-213ENSMUST00000201549 Tnp1P10856 55 aa5.04□□□□□ -1.6
Scn8a-213ENSMUST00000201549 Xirp2Q4U4S6 3784 aa5.03□□□□□ -1.6
Scn8a-213ENSMUST00000201549 Gm10318A0A1W2P728 225 aa5.02□□□□□ -1.61
Scn8a-213ENSMUST00000201549 A930033H14RikG5E8X6 103 aa5.01□□□□□ -1.61
Scn8a-213ENSMUST00000201549 Rps29P62274 56 aa4.99□□□□□ -1.61
Scn8a-213ENSMUST00000201549 Hspg2Q05793 3707 aaKnown RBP4.97□□□□□ -1.61
Scn8a-213ENSMUST00000201549 VwfQ8CIZ8 2813 aa4.96□□□□□ -1.62
Scn8a-213ENSMUST00000201549 Gm20537G3UYK7 97 aa4.93□□□□□ -1.62
Scn8a-213ENSMUST00000201549 Tenm2Q9WTS5 2764 aa4.88□□□□□ -1.63
Scn8a-213ENSMUST00000201549 2310079G19RikQ9D6L6 185 aa4.87□□□□□ -1.63
Scn8a-213ENSMUST00000201549 Col7a1Q63870 2944 aa4.86□□□□□ -1.63
Scn8a-213ENSMUST00000201549 Csmd3Q80T79 3707 aa4.86□□□□□ -1.63
Scn8a-213ENSMUST00000201549 Gm40193A0A1B0GT39 78 aa4.81□□□□□ -1.64
Scn8a-213ENSMUST00000201549 Gm9736A0A1W2P7N1 277 aa4.79□□□□□ -1.64
Scn8a-213ENSMUST00000201549 Megf8P60882 2789 aa4.73□□□□□ -1.65
Scn8a-213ENSMUST00000201549 Crct1Q6PAI5 102 aa4.72□□□□□ -1.65
Scn8a-213ENSMUST00000201549 Dnah14A0A140LIJ4 4489 aa4.7□□□□□ -1.66
Scn8a-213ENSMUST00000201549 Muc6Q80T03 2850 aa4.69□□□□□ -1.66
Scn8a-213ENSMUST00000201549 Huwe1Q7TMY8 4377 aaKnown RBP4.67□□□□□ -1.66
Scn8a-213ENSMUST00000201549 B930094E09RikQ8C4T2 136 aa4.66□□□□□ -1.66
Scn8a-213ENSMUST00000201549 Dnah7bL7N1Y0 4068 aa4.65□□□□□ -1.67
Scn8a-213ENSMUST00000201549 Gm6358A0A087WPH4 74 aa4.62□□□□□ -1.67
Scn8a-213ENSMUST00000201549 Gm11939A2A592 99 aa4.57□□□□□ -1.68
Scn8a-213ENSMUST00000201549 Gm17416Q30KP4 66 aa4.52□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Krtap3-2Q9D638 99 aa4.52□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Krtap3-3Q9D7P0 99 aa4.52□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Dnah10D3YYQ8 4591 aa4.49□□□□□ -1.69
Scn8a-213ENSMUST00000201549 2210017I01RikA0A0A6YVV1 95 aa4.48□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Kmt2aP55200 3966 aa4.48□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Dnah11E9Q7N9 4488 aa4.46□□□□□ -1.69
Scn8a-213ENSMUST00000201549 Sprr2kO70562 68 aa4.46□□□□□ -1.7
Scn8a-213ENSMUST00000201549 Dnah3Q8BW94 4083 aa4.45□□□□□ -1.7
Scn8a-213ENSMUST00000201549 Dnah17Q69Z23 4481 aa4.45□□□□□ -1.7
Scn8a-213ENSMUST00000201549 Krtap19-5O08632 62 aa4.44□□□□□ -1.7
Scn8a-213ENSMUST00000201549 PrkdcP97313 4128 aa4.42□□□□□ -1.7
Scn8a-213ENSMUST00000201549 Dnah6E9Q0B6 4144 aa4.39□□□□□ -1.71
Scn8a-213ENSMUST00000201549 Krtap13-1Q8K198 168 aa4.36□□□□□ -1.71
Scn8a-213ENSMUST00000201549 Krtap3-1A2A591 98 aa4.35□□□□□ -1.71
Scn8a-213ENSMUST00000201549 Gm17402F6Z0L5 76 aa4.34□□□□□ -1.71
Scn8a-213ENSMUST00000201549 Gm19668J3QMD1 248 aa4.34□□□□□ -1.71
Scn8a-213ENSMUST00000201549 Dnah9B1AR51 4484 aa4.32□□□□□ -1.72
Scn8a-213ENSMUST00000201549 Gm18596A0A1W2P860 280 aa4.29□□□□□ -1.72
Scn8a-213ENSMUST00000201549 Dnah5Q8VHE6 4621 aa4.29□□□□□ -1.72
Scn8a-213ENSMUST00000201549 TnxbO35452 4006 aa4.26□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Dnah1E9Q8T7 4250 aa4.26□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Dnah7cA0A087WR13 4024 aa4.26□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 86.1 ms