RNA–Protein interactions for RNA: ENSMUST00000046257.13

Sptan1-201, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 5 BASIC

Gene Sptan1, Length 7,820 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-201ENSMUST00000046257 Pkd1l1Q8R526 2615 aa4.89□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Akap9Q70FJ1 3797 aa4.89□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Hivep1Q03172 2688 aa4.88□□□□□ -1.63
Sptan1-201ENSMUST00000046257 A730071L15RikQ8C4X0 137 aa4.88□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Krtap13O88375 197 aa4.87□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Krtap10-4Q08EG8 221 aa4.87□□□□□ -1.63
Sptan1-201ENSMUST00000046257 4933415A04RikQ9D443 101 aa4.86□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Tenm4Q3UHK6 2771 aa4.86□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Gm2310J3QNJ2 377 aa4.84□□□□□ -1.63
Sptan1-201ENSMUST00000046257 Zzef1Q5SSH7 2924 aa4.82□□□□□ -1.64
Sptan1-201ENSMUST00000046257 Trank1Q8BV79 2999 aa4.81□□□□□ -1.64
Sptan1-201ENSMUST00000046257 Krtap10-10A0A1W2P7T6 217 aa4.79□□□□□ -1.64
Sptan1-201ENSMUST00000046257 DspE9Q557 2883 aaKnown RBP4.79□□□□□ -1.64
Sptan1-201ENSMUST00000046257 Rps29P62274 56 aa4.78□□□□□ -1.64
Sptan1-201ENSMUST00000046257 Krtap14O08640 167 aa4.75□□□□□ -1.65
Sptan1-201ENSMUST00000046257 FlncQ8VHX6 2726 aaKnown RBP4.75□□□□□ -1.65
Sptan1-201ENSMUST00000046257 Gm40193A0A1B0GT39 78 aa4.75□□□□□ -1.65
Sptan1-201ENSMUST00000046257 Celsr2Q9R0M0 2920 aa4.73□□□□□ -1.65
Sptan1-201ENSMUST00000046257 Chd9Q8BYH8 2885 aa4.71□□□□□ -1.65
Sptan1-201ENSMUST00000046257 2310061N02RikQ9D6S9 174 aa4.71□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Gm2696A0A1W2P709 240 aa4.7□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Muc5acE9QAQ8 3455 aa4.7□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Tnp2P11378 117 aa4.69□□□□□ -1.66
Sptan1-201ENSMUST00000046257 FcgbpE9Q0B5 2583 aa4.69□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Lama5Q61001 3718 aa4.68□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Tex15F8VPN2 2785 aa4.68□□□□□ -1.66
Sptan1-201ENSMUST00000046257 D6Ertd527eA0A0N4SWI3 464 aa4.67□□□□□ -1.66
Sptan1-201ENSMUST00000046257 LrbaQ9ESE1 2856 aa4.66□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Zfhx4Q9JJN2 3550 aa4.66□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Smg1Q8BKX6 3658 aaKnown RBP4.66□□□□□ -1.66
Sptan1-201ENSMUST00000046257 2310057N15RikQ9D6T8 200 aa4.65□□□□□ -1.66
Sptan1-201ENSMUST00000046257 Nf1Q04690 2841 aa4.65□□□□□ -1.67
Sptan1-201ENSMUST00000046257 ApcQ61315 2845 aa4.64□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Csmd1Q923L3 3564 aa4.63□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Tenm3Q9WTS6 2715 aa4.62□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Gm5965D3Z724 196 aa4.62□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Pdzd2E9Q1M1 2796 aa4.6□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Srrm2Q8BTI8 2703 aaKnown RBP4.6□□□□□ -1.67
Sptan1-201ENSMUST00000046257 Gm884A2A9H6 3643 aa4.59□□□□□ -1.67
Sptan1-201ENSMUST00000046257 SpenQ62504 3644 aaKnown RBP4.59□□□□□ -1.67
Sptan1-201ENSMUST00000046257 OtogO55225 2910 aa4.57□□□□□ -1.68
Sptan1-201ENSMUST00000046257 TgO08710 2766 aa4.49□□□□□ -1.69
Sptan1-201ENSMUST00000046257 B930094E09RikQ8C4T2 136 aa4.48□□□□□ -1.69
Sptan1-201ENSMUST00000046257 A930033H14RikG5E8X6 103 aa4.46□□□□□ -1.69
Sptan1-201ENSMUST00000046257 4933428G20RikQ9D3X4 101 aa4.46□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Prm2P07978 107 aa4.45□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Cmya5Q70KF4 3739 aa4.45□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Gm9918Q8BUR5 174 aa4.44□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Tenm1Q9WTS4 2731 aa4.44□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Gm20537G3UYK7 97 aa4.43□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Svep1A2AVA0 3567 aa4.42□□□□□ -1.7
Sptan1-201ENSMUST00000046257 SmcpP15265 143 aa4.4□□□□□ -1.7
Sptan1-201ENSMUST00000046257 Tenm2Q9WTS5 2764 aa4.4□□□□□ -1.71
Sptan1-201ENSMUST00000046257 Csmd2V9GX34 3611 aa4.4□□□□□ -1.71
Sptan1-201ENSMUST00000046257 Helz2E9QAM5 2947 aaKnown RBP4.39□□□□□ -1.71
Sptan1-201ENSMUST00000046257 Ank2Q8C8R3 3898 aa4.37□□□□□ -1.71
Sptan1-201ENSMUST00000046257 Col7a1Q63870 2944 aa4.31□□□□□ -1.72
Sptan1-201ENSMUST00000046257 Fbn1Q61554 2873 aaKnown RBP4.3□□□□□ -1.72
Sptan1-201ENSMUST00000046257 VwfQ8CIZ8 2813 aa4.26□□□□□ -1.73
Sptan1-201ENSMUST00000046257 Muc4Q8JZM8 3443 aa4.26□□□□□ -1.73
Sptan1-201ENSMUST00000046257 Megf8P60882 2789 aa4.25□□□□□ -1.73
Sptan1-201ENSMUST00000046257 Gm9736A0A1W2P7N1 277 aa4.24□□□□□ -1.73
Sptan1-201ENSMUST00000046257 Gm17402F6Z0L5 76 aa4.21□□□□□ -1.74
Sptan1-201ENSMUST00000046257 Gm17416Q30KP4 66 aa4.19□□□□□ -1.74
Sptan1-201ENSMUST00000046257 Gm19668J3QMD1 248 aa4.16□□□□□ -1.74
Sptan1-201ENSMUST00000046257 2210017I01RikA0A0A6YVV1 95 aa4.13□□□□□ -1.75
Sptan1-201ENSMUST00000046257 Muc6Q80T03 2850 aa4.12□□□□□ -1.75
Sptan1-201ENSMUST00000046257 2310079G19RikQ9D6L6 185 aa4.12□□□□□ -1.75
Sptan1-201ENSMUST00000046257 LystP97412 3788 aa4.11□□□□□ -1.75
Sptan1-201ENSMUST00000046257 BsnO88737 3942 aa4.08□□□□□ -1.76
Sptan1-201ENSMUST00000046257 CubnQ9JLB4 3623 aa4.05□□□□□ -1.76
Sptan1-201ENSMUST00000046257 Krtap19-5O08632 62 aa4.03□□□□□ -1.76
Sptan1-201ENSMUST00000046257 Gm10318A0A1W2P728 225 aa4.03□□□□□ -1.76
Sptan1-201ENSMUST00000046257 Gm6358A0A087WPH4 74 aa4.01□□□□□ -1.77
Sptan1-201ENSMUST00000046257 Huwe1Q7TMY8 4377 aaKnown RBP3.99□□□□□ -1.77
Sptan1-201ENSMUST00000046257 Crct1Q6PAI5 102 aa3.98□□□□□ -1.77
Sptan1-201ENSMUST00000046257 Dnah14A0A140LIJ4 4489 aa3.96□□□□□ -1.78
Sptan1-201ENSMUST00000046257 Xirp2Q4U4S6 3784 aa3.95□□□□□ -1.78
Sptan1-201ENSMUST00000046257 Hspg2Q05793 3707 aaKnown RBP3.92□□□□□ -1.78
Sptan1-201ENSMUST00000046257 Krtap13-1Q8K198 168 aa3.88□□□□□ -1.79
Sptan1-201ENSMUST00000046257 Sprr2kO70562 68 aa3.86□□□□□ -1.79
Sptan1-201ENSMUST00000046257 Gm11939A2A592 99 aa3.84□□□□□ -1.8
Sptan1-201ENSMUST00000046257 Csmd3Q80T79 3707 aa3.83□□□□□ -1.8
Sptan1-201ENSMUST00000046257 Gm18596A0A1W2P860 280 aa3.82□□□□□ -1.8
Sptan1-201ENSMUST00000046257 Krtap8-1O08633 61 aa3.76□□□□□ -1.81
Sptan1-201ENSMUST00000046257 Gm19402J3QJV4 266 aa3.75□□□□□ -1.81
Sptan1-201ENSMUST00000046257 Krtap7-1Q9D3I6 87 aa3.73□□□□□ -1.81
Sptan1-201ENSMUST00000046257 TnxbO35452 4006 aa3.73□□□□□ -1.81
Sptan1-201ENSMUST00000046257 Dnah10D3YYQ8 4591 aa3.72□□□□□ -1.81
Sptan1-201ENSMUST00000046257 Sprr2gO70558 76 aa3.68□□□□□ -1.82
Sptan1-201ENSMUST00000046257 Krtap3-1A2A591 98 aa3.68□□□□□ -1.82
Sptan1-201ENSMUST00000046257 PrkdcP97313 4128 aa3.68□□□□□ -1.82
Sptan1-201ENSMUST00000046257 Dnah7bL7N1Y0 4068 aa3.66□□□□□ -1.82
Sptan1-201ENSMUST00000046257 Kmt2aP55200 3966 aa3.64□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Vps13dB1ART2 4390 aa3.63□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Dnah17Q69Z23 4481 aa3.63□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Dnah6E9Q0B6 4144 aa3.63□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Dnah5Q8VHE6 4621 aa3.61□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Krtap3-2Q9D638 99 aa3.61□□□□□ -1.83
Sptan1-201ENSMUST00000046257 Krtap3-3Q9D7P0 99 aa3.61□□□□□ -1.83
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms