RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm11020F6ZGD5 61 aa15.2■□□□□ 0.02
Scn1b-201ENSMUST00000098548 MalO09198 153 aa15.2■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Gm10549Q3URY4 149 aa15.19■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Gm9903Q8C9Y8 129 aa15.19■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Sostdc1Q9CQN4 206 aa15.19■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Ighv1-56A0A0A6YXG2 117 aa15.19■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Vps25Q9CQ80 176 aa15.19■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Insl3O09107 122 aa15.18■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Prh1P05142 261 aa15.18■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Gm5617Q91VN2 117 aa15.18■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Cox6cQ9CPQ1 76 aa15.18■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Gm26920S4R2A5 56 aa15.18■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Igkv8-24A0A140T8P5 121 aa15.16■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Krtap11-1E9Q2E9 183 aa15.16■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Spink13Q3UTS8 97 aa15.16■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Phpt1Q9DAK9 124 aa15.16■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Hint1P70349 126 aaKnown RBP15.15■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Pxt1Q8K459 51 aa15.15■□□□□ 0.02
Scn1b-201ENSMUST00000098548 AY074887Q8R5F9 132 aa15.15■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Q9DAQ5 155 aa15.15■□□□□ 0.02
Scn1b-201ENSMUST00000098548 Pfn2Q9JJV2 140 aa15.14■□□□□ 0.01
Scn1b-201ENSMUST00000098548 TgO08710 2766 aa15.13■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Ighv13-2A0A0A6YWN3 119 aa15.12■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Try10Q792Z1 246 aaKnown RBP15.12■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Cox7b2Q9D2H1 82 aa15.12■□□□□ 0.01
Scn1b-201ENSMUST00000098548 B230359F08RikA0A0B4J1K3 109 aa15.11■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Cox8cA6H666 72 aa15.11■□□□□ 0.01
Scn1b-201ENSMUST00000098548 4930556J24RikQ9D4U7 146 aa15.11■□□□□ 0.01
Scn1b-201ENSMUST00000098548 SelenowP63300 88 aa15.1■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Ndufa12Q7TMF3 145 aaKnown RBP15.1■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Ly6hQ9WUC3 139 aa15.1■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Dnah7cA0A087WR13 4024 aa15.1■□□□□ 0.01
Scn1b-201ENSMUST00000098548 Cited1P97769 203 aa15.09■□□□□ 0.01
Scn1b-201ENSMUST00000098548 2310009B15RikA0A0A6YWI4 143 aa15.08■□□□□ 0
Scn1b-201ENSMUST00000098548 9430015G10RikA2ASP7 199 aa15.08■□□□□ 0
Scn1b-201ENSMUST00000098548 Gtf2h5Q8K2X8 71 aa15.08■□□□□ 0
Scn1b-201ENSMUST00000098548 Defb47Q30KN1 79 aa15.07■□□□□ 0
Scn1b-201ENSMUST00000098548 Gm29423A0A087WRM1 55 aa15.06■□□□□ 0
Scn1b-201ENSMUST00000098548 Rpl28P41105 137 aaKnown RBP15.05■□□□□ -0
Scn1b-201ENSMUST00000098548 Csdc2Q91YQ3 154 aa15.05■□□□□ -0
Scn1b-201ENSMUST00000098548 Dnal4Q9DCM4 105 aa15.05■□□□□ -0
Scn1b-201ENSMUST00000098548 Smim26Q3V460 107 aa15.04■□□□□ -0
Scn1b-201ENSMUST00000098548 Hbb-b2P02089 147 aa15.03■□□□□ -0
Scn1b-201ENSMUST00000098548 CenpwQ3URR0 86 aa15.03■□□□□ -0
Scn1b-201ENSMUST00000098548 Igkv4-92A0A0B4J1I2 117 aa15.02■□□□□ -0
Scn1b-201ENSMUST00000098548 C530025M09RikF6RGA8 229 aa15.02■□□□□ -0
Scn1b-201ENSMUST00000098548 Igkv8-16A0A0G2JDG9 121 aa15.02□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Igkv8-18A0A0B4J1J3 123 aa15□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Cox7bP56393 80 aa15□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Gm45213A0A0U1RNZ6 101 aa14.99□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Dnah9B1AR51 4484 aa14.99□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Gm16381A0A1Y7VKT9 73 aa14.98□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Gm10518F6UQQ9 182 aa14.98□□□□□ -0.01
Scn1b-201ENSMUST00000098548 P01819 144 aa14.98□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Gm16485Q8C4B7 115 aa14.98□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Pglyrp4Q0VB07 374 aa14.97□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Ociad2Q9D8W7 154 aa14.97□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Eif4ebp3Q80VV3 101 aa14.96□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Lgals4Q8K419 326 aa14.96□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Reg3dQ9QUS9 175 aa14.96□□□□□ -0.01
Scn1b-201ENSMUST00000098548 Dnah11E9Q7N9 4488 aa14.96□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Gm10135F6TEE5 83 aa14.94□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Camk2n2Q78WH7 79 aa14.94□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Trav13-2A0A075B649 110 aa14.94□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Igkv1-117A0A140T8M0 119 aa14.94□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Krtap10-4Q08EG8 221 aa14.94□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Trav14-1A0A0G2JF94 121 aa14.93□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Ube2d4D3YUH6 135 aa14.93□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Gm5153P01627 120 aa14.92□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Hrct1Q9D6B9 109 aa14.92□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Vps13dB1ART2 4390 aa14.91□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Fam240bJ3QMB3 78 aa14.91□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Sprr4Q8CGN8 76 aa14.91□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Ufsp1Q9CZP0 217 aa14.91□□□□□ -0.02
Scn1b-201ENSMUST00000098548 MifP34884 115 aaKnown RBP14.9□□□□□ -0.02
Scn1b-201ENSMUST00000098548 Acyp1P56376 99 aa14.9□□□□□ -0.02
Scn1b-201ENSMUST00000098548 A730009L09RikA0A1B0GS82 72 aa14.89□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Trav3-4A0A075B654 114 aa14.88□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Ube2wQ8VDW4 151 aa14.87□□□□□ -0.03
Scn1b-201ENSMUST00000098548 U90926O08546 118 aa14.86□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Gm17577J3QNF7 156 aa14.85□□□□□ -0.03
Scn1b-201ENSMUST00000098548 1700020N15RikL7MTX3 112 aa14.85□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Cdk2ap2Q9CPY4 127 aa14.85□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Ryr3A2AGL3 4863 aa14.85□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Wfdc3Q14AE4 130 aa14.85□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Wfdc12Q9JHY3 85 aa14.84□□□□□ -0.03
Scn1b-201ENSMUST00000098548 Xlr5cQ9JJR2 179 aa14.84□□□□□ -0.03
Scn1b-201ENSMUST00000098548 BC048502Q80Y74 154 aa14.83□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Mrpl52Q9D0Y8 121 aa14.83□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Defb29Q8BGW9 78 aa14.82□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Ryr2E9Q401 4966 aaKnown RBP14.82□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Igkv3-12A0A140T8P0 119 aa14.81□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Gm10735Q3US96 136 aa14.81□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Gm5142Q8C5X9 133 aa14.81□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Nupr2Q497P3 102 aa14.81□□□□□ -0.04
Scn1b-201ENSMUST00000098548 CnbpP53996 178 aaKnown RBP14.8□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Gm11627A6PWP4 55 aa14.79□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Defa1P11477 93 aa14.79□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Gm10845Q3UNY9 185 aa14.78□□□□□ -0.04
Scn1b-201ENSMUST00000098548 Dnah2P0C6F1 4456 aa14.77□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms