RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 A830031A19RikQ8BNT5 113 aa10.28□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Stab1Q8R4Y4 2571 aa10.28□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Igfn1Q3KNY0 2849 aa10.28□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Atp5eP56382 52 aa10.28□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Muc5acE9QAQ8 3455 aa10.28□□□□□ -0.76
Rtf1-201ENSMUST00000028767 Rpl28P41105 137 aaKnown RBP10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 MobpQ9D2P8 170 aa10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Lama5Q61001 3718 aa10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Chd9Q8BYH8 2885 aa10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Gm5142Q8C5X9 133 aa10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tmem243B2RVB9 118 aa10.27□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Gm2916Q9D9B9 127 aa10.26□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Ormdl1Q921I0 153 aa10.26□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Gm10772F7AIG4 85 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Gm10549Q3URY4 149 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Eif4ebp3Q80VV3 101 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 9430015G10RikA2ASP7 199 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Samd13D3YUG0 102 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Ube2bP63147 152 aa10.24□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Naa38Q9D2U5 125 aa10.23□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tmem213Q08EA8 116 aa10.23□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Gm11565A2A4M7 156 aa10.23□□□□□ -0.77
Rtf1-201ENSMUST00000028767 ScxQ64124 207 aa10.23□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Mast4Q811L6 2618 aa10.23□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Scgb1b2O35176 93 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Zfhx3Q61329 3726 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tmem254aP0DN89 123 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tmem254bP0DN90 123 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tmem254cP0DN91 123 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Tcl1b3P56842 122 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Ighv2-9-1A0A075B697 116 aa10.22□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Ube2d4D3YUH6 135 aa10.21□□□□□ -0.77
Rtf1-201ENSMUST00000028767 Nf1Q04690 2841 aa10.21□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Smim20D3Z7Q2 69 aa10.2□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Akap13E9Q394 2776 aa10.2□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Rbm3O89086 153 aaKnown RBP10.19□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Celsr2Q9R0M0 2920 aa10.19□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Gm10735Q3US96 136 aa10.18□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Igkv8-26A0A075B5N5 123 aa10.18□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Ighv10-1A0A0B4J1J6 119 aa10.17□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Gm43218A0A0G2JGT0 114 aa10.17□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Defa27F2Z403 93 aa10.17□□□□□ -0.78
Rtf1-201ENSMUST00000028767 EnhoQ8K1D8 76 aa10.17□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Fn1P11276 2477 aaKnown RBP10.17□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Gm10845Q3UNY9 185 aa10.16□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Nsd1O88491 2588 aaKnown RBP10.16□□□□□ -0.78
Rtf1-201ENSMUST00000028767 4930556J24RikQ9D4U7 146 aa10.16□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Gm5153P01627 120 aa10.16□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Kmt2bO08550 2713 aa10.16□□□□□ -0.78
Rtf1-201ENSMUST00000028767 Ighv8-13A0A075B5Y0 101 aa10.15□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Igkv4-92A0A0B4J1I2 117 aa10.15□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Smlr1J3QMJ4 66 aa10.14□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Cox7bP56393 80 aa10.14□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Fam19a1Q7TPG8 133 aa10.13□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Fam19a5Q91WE9 132 aa10.13□□□□□ -0.79
Rtf1-201ENSMUST00000028767 LrbaQ9ESE1 2856 aa10.12□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Gm37389A0A0A6YW05 95 aa10.12□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Gm28539A0A087WSL9 92 aa10.11□□□□□ -0.79
Rtf1-201ENSMUST00000028767 9530003J23RikQ8BM26 151 aa10.11□□□□□ -0.79
Rtf1-201ENSMUST00000028767 BikO70337 150 aa10.1□□□□□ -0.79
Rtf1-201ENSMUST00000028767 GhrhP16043 103 aa10.09□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Dph3Q8K0W9 82 aa10.09□□□□□ -0.79
Rtf1-201ENSMUST00000028767 Ighv2-9A0A075B5Q5 116 aa10.09□□□□□ -0.79
Rtf1-201ENSMUST00000028767 FasnP19096 2504 aaKnown RBP10.08□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Gm3618D3Z4P5 127 aa10.08□□□□□ -0.8
Rtf1-201ENSMUST00000028767 B9d2Q3UK10 175 aa10.08□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Ighv1-56A0A0A6YXG2 117 aa10.07□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Trav14-1A0A0G2JF94 121 aa10.07□□□□□ -0.8
Rtf1-201ENSMUST00000028767 A730009L09RikA0A1B0GS82 72 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Obox2E9PXV9 151 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Defb50Q6TU36 73 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 1700012A03RikQ9DAF1 130 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Gm17521F6QAC8 156 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Tcl1b5P56845 121 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Gm10401E9Q3K6 71 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Pde6gP09174 87 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Gm16485Q8C4B7 115 aa10.06□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Gm17509Q9CZ61 145 aa10.05□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Defb37Q7TMD2 62 aa10.05□□□□□ -0.8
Rtf1-201ENSMUST00000028767 A830005F24RikQ8BRT5 167 aa10.05□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Klk9Q32M27 251 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Defb12Q8K4N3 78 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Hivep1Q03172 2688 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Pet100P0DJE0 76 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Prr15lQ8JZM2 100 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Cd164Q9R0L9 197 aa10.03□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Defb40Q70KL2 73 aa10.02□□□□□ -0.8
Rtf1-201ENSMUST00000028767 Col6a5A6H584 2640 aa10.02□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Krtap11-1E9Q2E9 183 aa10.01□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Snhg11Q4G0K9 87 aa10.01□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Wfdc13Q5DQQ6 81 aa10.01□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Defb10Q8R2I8 73 aa10□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Brk1Q91VR8 75 aa10□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Svep1A2AVA0 3567 aa10□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Nbeal2Q6ZQA0 2742 aa9.99□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Gm7138L7N2C3 230 aa9.99□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Gm3238W4VSP7 230 aa9.99□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Ube2aQ9Z255 152 aa9.98□□□□□ -0.81
Rtf1-201ENSMUST00000028767 PscaP57096 123 aa9.98□□□□□ -0.81
Rtf1-201ENSMUST00000028767 Serp2Q6TAW2 65 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 7.6 ms