RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 4930519P11RikQ9CUJ8 166 aa11.06□□□□□ -0.64
Chd3-201ENSMUST00000092971 Znf706Q9D115 76 aaKnown RBP11.06□□□□□ -0.64
Chd3-201ENSMUST00000092971 MgamB5THE2 1827 aa11.06□□□□□ -0.64
Chd3-201ENSMUST00000092971 Ypel4Q65Z93 127 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Gm20604F8WIA3 75 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Smim1P0C8K7 78 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Rpl28P41105 137 aaKnown RBP11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Ly6g6cQ9Z1Q4 126 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Gm10337F7DEP7 55 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Fgfbp3Q1HCM0 245 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 SnurfQ9WU12 71 aa11.05□□□□□ -0.64
Chd3-201ENSMUST00000092971 Notch2O35516 2470 aa11.04□□□□□ -0.64
Chd3-201ENSMUST00000092971 Ighv2-6-8A0A0A6YWY9 116 aa11.04□□□□□ -0.64
Chd3-201ENSMUST00000092971 Kif26aQ52KG5 1881 aa11.04□□□□□ -0.64
Chd3-201ENSMUST00000092971 Gm10226O88253 85 aa11.04□□□□□ -0.64
Chd3-201ENSMUST00000092971 Bean1Q9EQG5 255 aa11.03□□□□□ -0.64
Chd3-201ENSMUST00000092971 AvpP35455 168 aa11.03□□□□□ -0.64
Chd3-201ENSMUST00000092971 SrarpQ3ULG3 163 aa11.03□□□□□ -0.64
Chd3-201ENSMUST00000092971 Q8K1L6 76 aa11.02□□□□□ -0.65
Chd3-201ENSMUST00000092971 Plxnb3Q9QY40 1902 aa11.02□□□□□ -0.65
Chd3-201ENSMUST00000092971 Pla2g2dQ9WVF6 144 aa11.02□□□□□ -0.65
Chd3-201ENSMUST00000092971 Rp1l1Q8CGM2 1859 aa11.01□□□□□ -0.65
Chd3-201ENSMUST00000092971 Gm6899Q3USS0 134 aa11□□□□□ -0.65
Chd3-201ENSMUST00000092971 PtprsB0V2N1 1907 aa11□□□□□ -0.65
Chd3-201ENSMUST00000092971 CrygfQ9CXV3 174 aa11□□□□□ -0.65
Chd3-201ENSMUST00000092971 1110002E22RikE0CYV9 1786 aa10.99□□□□□ -0.65
Chd3-201ENSMUST00000092971 DscamQ9ERC8 2013 aa10.99□□□□□ -0.65
Chd3-201ENSMUST00000092971 Pla2g2eQ9QUL3 142 aa10.98□□□□□ -0.65
Chd3-201ENSMUST00000092971 Myo9aQ8C170 2542 aa10.98□□□□□ -0.65
Chd3-201ENSMUST00000092971 Cdc42se2Q8BGH7 84 aa10.98□□□□□ -0.65
Chd3-201ENSMUST00000092971 Pcnx3Q8VI59 2028 aa10.98□□□□□ -0.65
Chd3-201ENSMUST00000092971 Gm5142Q8C5X9 133 aa10.98□□□□□ -0.65
Chd3-201ENSMUST00000092971 CrygeQ03740 174 aa10.97□□□□□ -0.65
Chd3-201ENSMUST00000092971 Igkv8-19A0A0G2JFN8 121 aa10.97□□□□□ -0.65
Chd3-201ENSMUST00000092971 Abca2P41234 2434 aa10.97□□□□□ -0.65
Chd3-201ENSMUST00000092971 Pla2g1bQ9Z0Y2 146 aa10.97□□□□□ -0.65
Chd3-201ENSMUST00000092971 Gm10570F6VB42 170 aa10.96□□□□□ -0.65
Chd3-201ENSMUST00000092971 Polr2kQ63871 58 aa10.96□□□□□ -0.65
Chd3-201ENSMUST00000092971 Ighv2-9-1A0A075B697 116 aa10.96□□□□□ -0.66
Chd3-201ENSMUST00000092971 D730001G18RikA0A087WQU7 115 aa10.96□□□□□ -0.66
Chd3-201ENSMUST00000092971 Defb42Q8BVB5 75 aa10.96□□□□□ -0.66
Chd3-201ENSMUST00000092971 4930524J08RikQ9CUJ5 163 aa10.95□□□□□ -0.66
Chd3-201ENSMUST00000092971 Ighv2-9A0A075B5Q5 116 aa10.95□□□□□ -0.66
Chd3-201ENSMUST00000092971 Pcdh15Q99PJ1 1943 aa10.94□□□□□ -0.66
Chd3-201ENSMUST00000092971 Gm10577Q3UDV9 132 aa10.94□□□□□ -0.66
Chd3-201ENSMUST00000092971 Wdr90Q6ZPG2 1874 aa10.94□□□□□ -0.66
Chd3-201ENSMUST00000092971 Gm9767G3X930 207 aa10.93□□□□□ -0.66
Chd3-201ENSMUST00000092971 Bri3P28662 125 aa10.93□□□□□ -0.66
Chd3-201ENSMUST00000092971 Defb37Q7TMD2 62 aa10.93□□□□□ -0.66
Chd3-201ENSMUST00000092971 Sprr2jO70561 109 aa10.92□□□□□ -0.66
Chd3-201ENSMUST00000092971 Gm19935A0A1B0GSF9 52 aa10.92□□□□□ -0.66
Chd3-201ENSMUST00000092971 Col4a6B1AVK5 1691 aa10.91□□□□□ -0.66
Chd3-201ENSMUST00000092971 4930432M17RikQ3V0W9 174 aa10.91□□□□□ -0.66
Chd3-201ENSMUST00000092971 Chchd7Q8K2Q5 85 aa10.91□□□□□ -0.66
Chd3-201ENSMUST00000092971 1700056E22RikF7CNM6 234 aa10.9□□□□□ -0.66
Chd3-201ENSMUST00000092971 B230217C12RikE9Q3Z1 139 aa10.89□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm10509O88255 85 aa10.88□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm5153P01627 120 aa10.88□□□□□ -0.67
Chd3-201ENSMUST00000092971 Defb2P82020 71 aa10.88□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm10135F6TEE5 83 aa10.88□□□□□ -0.67
Chd3-201ENSMUST00000092971 4930556J24RikQ9D4U7 146 aa10.87□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm28374F6SG70 93 aa10.87□□□□□ -0.67
Chd3-201ENSMUST00000092971 Reg3aO09037 175 aa10.87□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm16485Q8C4B7 115 aa10.86□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm10322F7D7I4 111 aa10.86□□□□□ -0.67
Chd3-201ENSMUST00000092971 Col24a1Q30D77 1733 aa10.86□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm9922Q8C3P1 144 aa10.85□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm28230A0A0A0MQ91 144 aa10.84□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm17606F6ZL36 78 aa10.84□□□□□ -0.67
Chd3-201ENSMUST00000092971 Hivep2Q3UHF7 2430 aa10.84□□□□□ -0.67
Chd3-201ENSMUST00000092971 Gm10845Q3UNY9 185 aa10.83□□□□□ -0.68
Chd3-201ENSMUST00000092971 Shisa2Q8QZV2 295 aa10.83□□□□□ -0.68
Chd3-201ENSMUST00000092971 Ttc28Q80XJ3 2450 aa10.83□□□□□ -0.68
Chd3-201ENSMUST00000092971 Spink13Q3UTS8 97 aa10.83□□□□□ -0.68
Chd3-201ENSMUST00000092971 Nup210Q9QY81 1886 aaKnown RBP10.82□□□□□ -0.68
Chd3-201ENSMUST00000092971 A730009L09RikA0A1B0GS82 72 aa10.82□□□□□ -0.68
Chd3-201ENSMUST00000092971 Gm12216A0A1W2P827 62 aa10.82□□□□□ -0.68
Chd3-201ENSMUST00000092971 SrcapA0A087WQ44 3271 aa10.81□□□□□ -0.68
Chd3-201ENSMUST00000092971 Pla2g2cP48076 150 aa10.81□□□□□ -0.68
Chd3-201ENSMUST00000092971 6430550D23RikE9Q1X6 194 aa10.8□□□□□ -0.68
Chd3-201ENSMUST00000092971 A830031A19RikQ8BNT5 113 aa10.8□□□□□ -0.68
Chd3-201ENSMUST00000092971 Znf575Q3TXZ1 239 aa10.8□□□□□ -0.68
Chd3-201ENSMUST00000092971 Gm10197F6QEY5 67 aa10.79□□□□□ -0.68
Chd3-201ENSMUST00000092971 Q9DAA7 145 aa10.79□□□□□ -0.68
Chd3-201ENSMUST00000092971 UqcrqQ9CQ69 82 aa10.78□□□□□ -0.68
Chd3-201ENSMUST00000092971 Gm17509Q9CZ61 145 aa10.78□□□□□ -0.68
Chd3-201ENSMUST00000092971 A930009A15RikG3UYI6 118 aa10.78□□□□□ -0.68
Chd3-201ENSMUST00000092971 Gm43218A0A0G2JGT0 114 aa10.78□□□□□ -0.68
Chd3-201ENSMUST00000092971 Tet2Q4JK59 1912 aaKnown RBP10.77□□□□□ -0.69
Chd3-201ENSMUST00000092971 Cd164l2Q9D6W7 172 aa10.77□□□□□ -0.69
Chd3-201ENSMUST00000092971 Cd164Q9R0L9 197 aa10.77□□□□□ -0.69
Chd3-201ENSMUST00000092971 Sostdc1Q9CQN4 206 aa10.76□□□□□ -0.69
Chd3-201ENSMUST00000092971 Gm10300Q8C8P7 189 aa10.76□□□□□ -0.69
Chd3-201ENSMUST00000092971 Defb1P56386 69 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Defb10Q8R2I8 73 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Znf580Q9DB38 172 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Gm3443F7CCV5 94 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Chchd10Q7TNL9 138 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Zfand2aQ9JII7 171 aa10.75□□□□□ -0.69
Chd3-201ENSMUST00000092971 Gm10999F6Q4M4 69 aa10.75□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms