RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Ighv5-8A0A075B676 92 aa8.15□□□□□ -1.1
Prpf40b-202ENSMUST00000118287 Zfp951A0A087WRH0 451 aa8.15□□□□□ -1.1
Prpf40b-202ENSMUST00000118287 Defb18Q30KP5 85 aa8.15□□□□□ -1.1
Prpf40b-202ENSMUST00000118287 Abca2P41234 2434 aa8.15□□□□□ -1.1
Prpf40b-202ENSMUST00000118287 Col7a1Q63870 2944 aa8.15□□□□□ -1.1
Prpf40b-202ENSMUST00000118287 TshbP12656 138 aa8.15□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Sumo2P61957 95 aaKnown RBP8.15□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Defb30Q30KN4 75 aa8.15□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 CnfnQ6PCW6 111 aa8.15□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv3-1A0A075B5S6 116 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Olfr311Q5NC59 308 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Dand5Q76LW6 185 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Dido1Q8C9B9 2256 aaKnown RBP8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm11213A0A1B0GR83 88 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 OxtP35454 125 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Sdhaf1Q3U276 118 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Klhdc1Q80YG3 406 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 4930447F04RikA2AFR2 126 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 1700056E22RikF7CNM6 234 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 AW146154Q3TPQ7 468 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ang5Q5GAN1 145 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Nbl1Q61477 178 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Cyyr1Q8VIH7 165 aa8.14□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv14-1A0A075B5R4 117 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Mrps12O35680 139 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Tex26Q0VB26 296 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ndufa4Q62425 82 aaKnown RBP8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv3-4A0A0A6YXF1 117 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Igkv20-101-2A0A0G2JDU3 113 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Fhl2O70433 279 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm1553Q66VB7 94 aa8.13□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 P01837 106 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Rab37Q9JKM7 223 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv1-61P01749 117 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Cox7a1P56392 80 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Q4KKZ1 196 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 FshbQ60687 130 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm28044L7N1X0 119 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ube2e1P52482 193 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Fxyd5P97808 178 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Defa20Q45VN2 95 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ormdl2Q9CQZ0 153 aa8.12□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv3-8A0A075B5T0 131 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Igkv4-59A0A0B4J1I8 117 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 SrarpQ3ULG3 163 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Olfr313Q5NC55 308 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv1-53A0A075B5W3 117 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv8-12A0A0G2JDE1 119 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Rpl39P62892 51 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ccl21aP84444 133 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ccl21bP86792 133 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ccl21cP86793 133 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm9961Q8BNV2 113 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm4861Q8C5A4 106 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 A130051J06RikQ8CAU1 227 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Celsr2Q9R0M0 2920 aa8.11□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Vpreb1P13372 142 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Foxi1Q922I5 372 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ndufa3Q9CQ91 84 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 RhohQ9D3G9 191 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Igkv4-71A0A0G2JEH0 117 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 OtogO55225 2910 aa8.1□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Foxc1Q61572 553 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Sox16Q62247 57 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv1-9A0A0A6YW37 117 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 B230217C12RikE9Q3Z1 139 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 P01747 120 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Foxi2Q3I5G5 311 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Tmem14cQ9CQN6 114 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ankhd1E9PUR0 2548 aaKnown RBP8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ighv1-74A0A0G2JGK2 117 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm45717A0A1B0GT68 152 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Ccl19O70460 108 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Gm5629P06327 117 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Triap1Q9D8Z2 76 aa8.09□□□□□ -1.11
Prpf40b-202ENSMUST00000118287 Defb45Q3V490 66 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Q5BN45 167 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Atp5lQ9CPQ8 103 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ighv1-80A0A075B5Y3 117 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm11565A2A4M7 156 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Hoxd3P09027 433 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Lmo4P61969 165 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Brk1Q91VR8 75 aa8.08□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 4930518I15RikQ3V2W7 57 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gemin7Q9CWY4 129 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Egr2P08152 470 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Psmb11Q8BG41 302 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Igkv4-57-1A0A075B5M4 119 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm35549A0A0N4SUS7 141 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm11444F6QMA6 170 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 P01812 117 aa8.07□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Unc79Q0KK59 2596 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Igkv4-74A0A0B4J1I3 119 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm17334Q8C6U3 126 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Gm10295Q8CCF3 114 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Dpm3Q9D1Q4 92 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Q9D8Q6 235 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Defa7P50705 93 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 Ss18Q62280 418 aa8.06□□□□□ -1.12
Prpf40b-202ENSMUST00000118287 TeppQ6IMH0 216 aa8.06□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 102.5 ms