RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	YIL024C	P40543	189 aa		3.23	□□□□□ -1.89
MSS18	YPR134W	SAE2	P46946	345 aa		3.23	□□□□□ -1.89
MSS18	YPR134W	UME1	Q03010	460 aa		3.23	□□□□□ -1.89
MSS18	YPR134W	TRM3	Q07527	1436 aa		3.23	□□□□□ -1.89
MSS18	YPR134W	PDR12	Q02785	1511 aa		3.23	□□□□□ -1.89
MSS18	YPR134W	FAT1	P38225	669 aa		3.22	□□□□□ -1.89
MSS18	YPR134W	SRP68	P38687	599 aa	Known RBP	3.22	□□□□□ -1.89
MSS18	YPR134W	LAS21	P40367	830 aa		3.22	□□□□□ -1.89
MSS18	YPR134W	CIR1	P42940	261 aa		3.22	□□□□□ -1.89
MSS18	YPR134W	DNM1	P54861	757 aa		3.22	□□□□□ -1.89
MSS18	YPR134W	HRD3	Q05787	833 aa		3.22	□□□□□ -1.89
MSS18	YPR134W	NUP145	P49687	1317 aa		3.21	□□□□□ -1.89
MSS18	YPR134W	SNQ2	P32568	1501 aa	Known RBP	3.21	□□□□□ -1.9
MSS18	YPR134W	YMR085W	P0CF18	432 aa		3.21	□□□□□ -1.9
MSS18	YPR134W	YJU2	P28320	278 aa	Predicted RBP	3.21	□□□□□ -1.9
MSS18	YPR134W	NMD2	P38798	1089 aa	Known RBP	3.21	□□□□□ -1.9
MSS18	YPR134W	MDR1	P53258	950 aa		3.21	□□□□□ -1.9
MSS18	YPR134W	COP1	P53622	1201 aa	Known RBP	3.21	□□□□□ -1.9
MSS18	YPR134W	PCL8	Q08966	492 aa		3.21	□□□□□ -1.9
MSS18	YPR134W	AIM44	Q99299	758 aa		3.21	□□□□□ -1.9
MSS18	YPR134W	CAT8	P39113	1433 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	CET1	O13297	549 aa	Predicted RBP	3.2	□□□□□ -1.9
MSS18	YPR134W	YPK1	P12688	680 aa	Known RBP	3.2	□□□□□ -1.9
MSS18	YPR134W	CWH43	P25618	953 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	COQ3	P27680	312 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	SDH8	P38345	138 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	VTC3	Q02725	835 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	HER1	Q12276	1246 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	not detected
MSS18	YPR134W	VPS5	Q92331	675 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	YRF1-1	P0CX20	1796 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	YRF1-5	P0CX21	1796 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	YRF1-8	P0CX22	1796 aa		3.2	□□□□□ -1.9
MSS18	YPR134W	NUP170	P38181	1502 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	ILS1	P09436	1072 aa	Known RBP	3.19	□□□□□ -1.9
MSS18	YPR134W	RPS21A	P0C0V8	87 aa	Known RBP	3.19	□□□□□ -1.9
MSS18	YPR134W	PCK1	P10963	549 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	CDC5	P32562	705 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	RMA1	P36001	430 aa	Known RBP	3.19	□□□□□ -1.9
MSS18	YPR134W	MAM1	P40065	302 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	PEA2	P40091	420 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	COG2	P53271	262 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	AAT1	Q01802	451 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	CYK3	Q07533	885 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	BUD7	Q08754	746 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	FAP7	Q12055	197 aa	Predicted RBP	3.19	□□□□□ -1.9
MSS18	YPR134W	YOR111W	Q99210	232 aa		3.19	□□□□□ -1.9
MSS18	YPR134W	PNO1	Q99216	274 aa	Known RBP	3.19	□□□□□ -1.9
MSS18	YPR134W	HXT4	P32467	576 aa		3.18	□□□□□ -1.9
MSS18	YPR134W	CCT4	P39078	528 aa	Known RBP	3.18	□□□□□ -1.9
MSS18	YPR134W	NOP2	P40991	618 aa	Known RBP	3.18	□□□□□ -1.9
MSS18	YPR134W	NGL1	Q08213	363 aa	Known RBP	3.18	□□□□□ -1.9
MSS18	YPR134W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
MSS18	YPR134W	ULS1	Q08562	1619 aa		3.18	□□□□□ -1.9
MSS18	YPR134W	SPO14	P36126	1683 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	DOP1	Q03921	1698 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	IQG1	Q12280	1495 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YER190C-B	P0CX94	160 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YEL077W-A	P0CX95	160 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YGR296C-B	P0CX96	160 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YPL283W-B	P0CX97	160 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YPR204C-A	P0CX98	160 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	ATO2	P32907	282 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	GCS1	P35197	352 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	FTH1	P38310	465 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	TOM71	P38825	639 aa	Known RBP	3.17	□□□□□ -1.9
MSS18	YPR134W	YAT2	P40017	923 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	GPP1	P41277	250 aa	Known RBP	3.17	□□□□□ -1.9
MSS18	YPR134W	MDV1	P47025	714 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	BOP3	P53958	396 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	SKY1	Q03656	742 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	RAD33	Q04231	177 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	SRL1	Q08673	210 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YPR027C	Q12079	277 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	YGR161W-C	Q3E744	92 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	BNI1	P41832	1953 aa		3.17	□□□□□ -1.9
MSS18	YPR134W	GDB1	Q06625	1536 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	CHO2	P05374	869 aa	Known RBP	3.16	□□□□□ -1.9
MSS18	YPR134W	YEL076C-A	P0CX16	216 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	YLR464W	P0CX17	216 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	PLC1	P32383	869 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	MTG2	P38860	518 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	YEL076C	P39971	216 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	YGR237C	P50089	785 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	SNU56	Q03782	492 aa	Known RBP	3.16	□□□□□ -1.9
MSS18	YPR134W	ATX2	Q12067	313 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	RMP1	Q12530	201 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	MMS1	Q06211	1407 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	PDR10	P51533	1564 aa		3.16	□□□□□ -1.9
MSS18	YPR134W	SEC7	P11075	2009 aa	Known RBP	3.15	□□□□□ -1.9
MSS18	YPR134W	PDR15	Q04182	1529 aa	Known RBP	3.15	□□□□□ -1.9
MSS18	YPR134W	AIM17	P23180	465 aa	Known RBP	3.15	□□□□□ -1.91
MSS18	YPR134W	GDA1	P32621	518 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	LNP1	P38878	278 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	FPR3	P38911	411 aa	Known RBP	3.15	□□□□□ -1.91
MSS18	YPR134W	YIR016W	P40572	265 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	IRC5	P43610	853 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	DUG1	P43616	481 aa	Known RBP	3.15	□□□□□ -1.91
MSS18	YPR134W	YNR029C	P53729	429 aa	Known RBP	3.15	□□□□□ -1.91
MSS18	YPR134W	GRS2	Q06817	618 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms