RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W UBX6P47049 396 aa5.45□□□□□ -1.54
LDB18YLL049W COG7P53195 279 aa5.45□□□□□ -1.54
LDB18YLL049W COP1P53622 1201 aaKnown RBP5.45□□□□□ -1.54
LDB18YLL049W ARO80Q04052 950 aa5.45□□□□□ -1.54
LDB18YLL049W YMR018WQ04364 514 aa5.45□□□□□ -1.54
LDB18YLL049W PHO4P07270 312 aaKnown RBP5.44□□□□□ -1.54
LDB18YLL049W CDC4P07834 779 aa5.44□□□□□ -1.54
LDB18YLL049W CDC15P27636 974 aa5.44□□□□□ -1.54
LDB18YLL049W PSO2P30620 661 aa5.44□□□□□ -1.54
LDB18YLL049W UTR2P32623 467 aa5.44□□□□□ -1.54
LDB18YLL049W YKL091CP33324 310 aaKnown RBP5.44□□□□□ -1.54
LDB18YLL049W CSG2P35206 410 aa5.44□□□□□ -1.54
LDB18YLL049W TAE1P38340 232 aa5.44□□□□□ -1.54
LDB18YLL049W URA8P38627 578 aaPredicted RBP5.44□□□□□ -1.54
LDB18YLL049W LAM1P38851 1228 aa5.44□□□□□ -1.54
LDB18YLL049W RPT2P40327 437 aaKnown RBP5.44□□□□□ -1.54
LDB18YLL049W ALR2P43553 858 aa5.44□□□□□ -1.54
LDB18YLL049W NBP35P52920 328 aa5.44□□□□□ -1.54
LDB18YLL049W AIM14P53109 570 aa5.44□□□□□ -1.54
LDB18YLL049W DRN1P53255 507 aaKnown RBP5.44□□□□□ -1.54
LDB18YLL049W ISU1Q03020 165 aa5.44□□□□□ -1.54
LDB18YLL049W YDR131CQ03899 556 aa5.44□□□□□ -1.54
LDB18YLL049W MCP2Q06567 569 aa5.44□□□□□ -1.54
LDB18YLL049W CDA2Q06703 312 aa5.44□□□□□ -1.54
LDB18YLL049W ATG10Q07879 167 aa5.44□□□□□ -1.54
LDB18YLL049W JIP3O13555 125 aa5.43□□□□□ -1.54
LDB18YLL049W LYP1P32487 611 aa5.43□□□□□ -1.54
LDB18YLL049W MRP4P32902 394 aa5.43□□□□□ -1.54
LDB18YLL049W YKL050CP35736 922 aa5.43□□□□□ -1.54
LDB18YLL049W STL1P39932 569 aa5.43□□□□□ -1.54
LDB18YLL049W DOS2P54858 310 aa5.43□□□□□ -1.54
LDB18YLL049W GPD1Q00055 391 aaKnown RBP5.43□□□□□ -1.54
LDB18YLL049W YDR444WQ04093 687 aa5.43□□□□□ -1.54
LDB18YLL049W ENT2Q05785 613 aa5.43□□□□□ -1.54
LDB18YLL049W INH1P01097 85 aa5.42□□□□□ -1.54
LDB18YLL049W PPR1P07272 904 aaPredicted RBP5.42□□□□□ -1.54
LDB18YLL049W POL30P15873 258 aaKnown RBP5.42□□□□□ -1.54
LDB18YLL049W RPB10P22139 70 aa5.42□□□□□ -1.54
LDB18YLL049W DAL2P25335 343 aa5.42□□□□□ -1.54
LDB18YLL049W MCM2P29469 868 aa5.42□□□□□ -1.54
LDB18YLL049W DYS1P38791 387 aa5.42□□□□□ -1.54
LDB18YLL049W STU2P46675 888 aa5.42□□□□□ -1.54
LDB18YLL049W SNG1P46950 547 aa5.42□□□□□ -1.54
LDB18YLL049W GLG2P47011 380 aa5.42□□□□□ -1.54
LDB18YLL049W TAN1P53072 289 aaPredicted RBP5.42□□□□□ -1.54
LDB18YLL049W ORC3P54790 616 aa5.42□□□□□ -1.54
LDB18YLL049W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54 RIP-Chip
LDB18YLL049W VHS1Q03785 461 aa5.42□□□□□ -1.54
LDB18YLL049W TLG2Q08144 397 aa5.42□□□□□ -1.54
LDB18YLL049W YPL066WQ12194 479 aa5.42□□□□□ -1.54
LDB18YLL049W PEX11Q12462 236 aa5.42□□□□□ -1.54
LDB18YLL049W SEC39Q12745 709 aa5.42□□□□□ -1.54
LDB18YLL049W PAB1P04147 577 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54 RIP-Chip
LDB18YLL049W YER152CP10356 443 aa5.41□□□□□ -1.54
LDB18YLL049W DAT1P13483 248 aaKnown RBP5.41□□□□□ -1.54
LDB18YLL049W PPH21P23594 369 aa5.41□□□□□ -1.54
LDB18YLL049W RDS1P25611 832 aa5.41□□□□□ -1.54
LDB18YLL049W GCD6P32501 712 aaKnown RBP5.41□□□□□ -1.54
LDB18YLL049W APM3P38153 483 aa5.41□□□□□ -1.54
LDB18YLL049W YEL075CP39972 122 aa5.41□□□□□ -1.54
LDB18YLL049W CFD1P40558 293 aa5.41□□□□□ -1.54
LDB18YLL049W SET2P46995 733 aaKnown RBP5.41□□□□□ -1.54
LDB18YLL049W MNT2P53059 558 aa5.41□□□□□ -1.54
LDB18YLL049W PUS2P53167 370 aa5.41□□□□□ -1.54
LDB18YLL049W KTR6P54070 446 aa5.41□□□□□ -1.54
LDB18YLL049W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
LDB18YLL049W GLE1Q12315 538 aa5.41□□□□□ -1.54
LDB18YLL049W MIH1P23748 554 aa5.4□□□□□ -1.54
LDB18YLL049W LIP5P32875 414 aa5.4□□□□□ -1.54
LDB18YLL049W MKS1P34072 584 aa5.4□□□□□ -1.54
LDB18YLL049W PIM1P36775 1133 aa5.4□□□□□ -1.54
LDB18YLL049W NPR3P38742 1146 aa5.4□□□□□ -1.54
LDB18YLL049W SPT8P38915 602 aa5.4□□□□□ -1.54
LDB18YLL049W VAC8P39968 578 aa5.4□□□□□ -1.54
LDB18YLL049W MAD1P40957 749 aa5.4□□□□□ -1.54
LDB18YLL049W BIR1P47134 954 aa5.4□□□□□ -1.54
LDB18YLL049W YNR063WP53749 607 aa5.4□□□□□ -1.54
LDB18YLL049W SYH1Q02875 849 aaKnown RBP5.4□□□□□ -1.54
LDB18YLL049W ADI1Q03677 179 aa5.4□□□□□ -1.54
LDB18YLL049W GIR2Q03768 265 aaPredicted RBP5.4□□□□□ -1.54
LDB18YLL049W ARA2Q04212 335 aa5.4□□□□□ -1.54
LDB18YLL049W SPR28Q04921 423 aa5.4□□□□□ -1.54
LDB18YLL049W YOL024WQ08172 172 aa5.4□□□□□ -1.54
LDB18YLL049W YOL075CQ08234 1294 aa5.4□□□□□ -1.54
LDB18YLL049W BDS1Q08347 646 aa5.4□□□□□ -1.54
LDB18YLL049W APL5Q08951 932 aaKnown RBP5.4□□□□□ -1.54
LDB18YLL049W SFI1Q12369 946 aa5.4□□□□□ -1.54
LDB18YLL049W RPP2BP02400 110 aaKnown RBP5.39□□□□□ -1.55
LDB18YLL049W MRPL8P22353 238 aa5.39□□□□□ -1.55
LDB18YLL049W SNT1P25357 1226 aa5.39□□□□□ -1.55
LDB18YLL049W LDB16P25587 256 aa5.39□□□□□ -1.55
LDB18YLL049W KAR9P32526 644 aa5.39□□□□□ -1.55
LDB18YLL049W TFC3P34111 1160 aa5.39□□□□□ -1.55
LDB18YLL049W PRX1P34227 261 aaKnown RBP5.39□□□□□ -1.55
LDB18YLL049W SPC42P36094 363 aa5.39□□□□□ -1.55
LDB18YLL049W EDC3P39998 551 aaKnown RBP5.39□□□□□ -1.55
LDB18YLL049W SPG5P42933 373 aa5.39□□□□□ -1.55
LDB18YLL049W SAM37P50110 327 aa5.39□□□□□ -1.55
LDB18YLL049W SUT1P53032 299 aaKnown RBP5.39□□□□□ -1.55
LDB18YLL049W YTP1P53584 459 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms