RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	RIOK1	Q9BRS2	568 aa	Known RBP	18.22	■□□□□ 0.51
PHGDH-231	ENST00000641939	KCNH4	Q9UQ05	1017 aa		18.22	■□□□□ 0.51
PHGDH-231	ENST00000641939	NAV1	Q8NEY1	1877 aa		18.22	■□□□□ 0.51
PHGDH-231	ENST00000641939	ZNF532	Q9HCE3	1301 aa		18.22	■□□□□ 0.51
PHGDH-231	ENST00000641939	MAGEB6P1	A0A0J9YX57	407 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	TCRBV5S4A2T	A0A5A2	114 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	FKTN	O75072	461 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	PTPRA	P18433	802 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	USP5	P45974	858 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	FAM43A	Q8N2R8	423 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	MCOLN1	Q9GZU1	580 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	PALD1	Q9ULE6	856 aa		18.21	■□□□□ 0.51
PHGDH-231	ENST00000641939	CXCL11	O14625	94 aa		18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	HDAC1	Q13547	482 aa	Predicted RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	TAF1C	Q15572	869 aa	Predicted RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	CTU1	Q7Z7A3	348 aa	Known RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	FOXP4	Q8IVH2	680 aa	Predicted RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	ABHD8	Q96I13	439 aa		18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	ZCCHC17	Q9NP64	241 aa	Known RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	SAP30BP	Q9UHR5	308 aa	Known RBP	18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	ZHX2	Q9Y6X8	837 aa		18.2	■□□□□ 0.5
PHGDH-231	ENST00000641939	BTBD19	C9JJ37	291 aa		18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	HLA-DOA	P06340	250 aa		18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	ADD2	P35612	726 aa		18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	METTL16	Q86W50	562 aa	Known RBP	18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	TRIM34	Q9BYJ4	488 aa		18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	ZFYVE28	Q9HCC9	887 aa		18.19	■□□□□ 0.5
PHGDH-231	ENST00000641939	DDX60L	Q5H9U9	1706 aa	Known RBP	18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	TSHZ3	Q63HK5	1081 aa		18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	GCC1	Q96CN9	775 aa		18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	AFG3L2	Q9Y4W6	797 aa		18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	TTC41P	Q6P2S7	1318 aa		18.18	■□□□□ 0.5
PHGDH-231	ENST00000641939	CAP2	P40123	477 aa		18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	SLC4A8	Q2Y0W8	1093 aa		18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	ZSCAN25	Q6NSZ9	544 aa		18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	DNAJC18	Q9H819	358 aa		18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	BAZ2A	Q9UIF9	1905 aa	Known RBP	18.17	■□□□□ 0.5
PHGDH-231	ENST00000641939	MOGS	Q13724	837 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	RRP1B	Q14684	758 aa	Known RBP	18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	UBE3C	Q15386	1083 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	SLFNL1	Q499Z3	407 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	ANKRD45	Q5TZF3	282 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	ANKRD23	Q86SG2	305 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	LCORL	Q8N3X6	602 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939	EXOC6	Q8TAG9	804 aa		18.16	■□□□□ 0.5
PHGDH-231	ENST00000641939		A0A0G2JLL6	359 aa	Predicted RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	ERC2	O15083	957 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	PKN2	Q16513	984 aa	Known RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	FASTKD5	Q7L8L6	764 aa	Known RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	TTC6	Q86TZ1	520 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	CCDC84	Q86UT8	332 aa	Predicted RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	TBC1D2	Q9BYX2	928 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	EHD4	Q9H223	541 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	ARMT1	Q9H993	441 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	MYH8	P13535	1937 aa		18.15	■□□□□ 0.5
PHGDH-231	ENST00000641939	TRIM75P	A6NK02	468 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	USP17L5	A8MUK1	530 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	PDHX	O00330	501 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	MBD4	O95243	580 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	SP3	Q02447	781 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	KBTBD3	Q8NAB2	608 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	ERO1A	Q96HE7	468 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	RWDD1	Q9H446	243 aa	Predicted RBP	18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	SERPINB13	Q9UIV8	391 aa		18.14	■□□□□ 0.49
PHGDH-231	ENST00000641939	LOC285556	D6RIA3	1793 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	TLR2	O60603	784 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	GLRX3	O76003	335 aa	Known RBP	18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	CHGB	P05060	677 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	POLR3D	P05423	398 aa	Predicted RBP	18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	ASNS	P08243	561 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	MX1	P20591	662 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	GPAT2	Q6NUI2	795 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	GADL1	Q6ZQY3	521 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	ZNF280C	Q8ND82	737 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	PI4K2B	Q8TCG2	481 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	SDR42E1	Q8WUS8	393 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	DCP1A	Q9NPI6	582 aa	Predicted RBP	18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	GINM1	Q9NU53	330 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	MCM9	Q9NXL9	1143 aa		18.13	■□□□□ 0.49
PHGDH-231	ENST00000641939	SPP2	Q13103	211 aa		18.12	■□□□□ 0.49
PHGDH-231	ENST00000641939	CD99L2	Q8TCZ2	262 aa		18.12	■□□□□ 0.49
PHGDH-231	ENST00000641939	AS3MT	Q9HBK9	375 aa		18.12	■□□□□ 0.49
PHGDH-231	ENST00000641939	ATP8A2	Q9NTI2	1148 aa		18.12	■□□□□ 0.49
PHGDH-231	ENST00000641939	SALL3	Q9BXA9	1300 aa		18.12	■□□□□ 0.49
PHGDH-231	ENST00000641939	CCDC85C	A6NKD9	419 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	GDF11	O95390	407 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	PLCD1	P51178	756 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	JAG1	P78504	1218 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	TATDN1	Q6P1N9	297 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	PUS7L	Q9H0K6	701 aa	Known RBP	18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	ZBTB21	Q9ULJ3	1066 aa		18.11	■□□□□ 0.49
PHGDH-231	ENST00000641939	SLC45A1	Q9Y2W3	748 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms