RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RRP1BQ14684 758 aaKnown RBP20.93■□□□□ 0.94
PHGDH-227ENST00000641811 SCYL3Q8IZE3 742 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 KBTBD3Q8NAB2 608 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 BRI3BPQ8WY22 251 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 R3HDMLQ9H3Y0 253 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 PI4KBQ9UBF8 816 aa20.93■□□□□ 0.94
PHGDH-227ENST00000641811 SIPA1L1O43166 1804 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 CCL15-CCL14A0A0B4J2E2 113 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 TESPA1A2RU30 521 aaPredicted RBP20.92■□□□□ 0.94
PHGDH-227ENST00000641811 GLRX3O76003 335 aaKnown RBP20.92■□□□□ 0.94
PHGDH-227ENST00000641811 MBD4O95243 580 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 GTF2A2P52657 109 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 PPATQ06203 517 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 UBE3CQ15386 1083 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 CCL15Q16663 113 aa20.92■□□□□ 0.94
PHGDH-227ENST00000641811 CRNKL1Q9BZJ0 848 aaKnown RBP20.92■□□□□ 0.94
PHGDH-227ENST00000641811 PRKAB2O43741 272 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 CTNND1O60716 968 aaKnown RBP20.91■□□□□ 0.94
PHGDH-227ENST00000641811 LAMB1P07942 1786 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 PTPRAP18433 802 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 ZSCAN25Q6NSZ9 544 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 CCDC84Q86UT8 332 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-227ENST00000641811 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 PUS7LQ9H0K6 701 aaKnown RBP20.91■□□□□ 0.94
PHGDH-227ENST00000641811 DNAJC18Q9H819 358 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 PICK1Q9NRD5 415 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 STAP2Q9UGK3 403 aa20.91■□□□□ 0.94
PHGDH-227ENST00000641811 HERC5Q9UII4 1024 aaKnown RBP20.91■□□□□ 0.94
PHGDH-227ENST00000641811 PDE1AP54750 535 aa20.9■□□□□ 0.94
PHGDH-227ENST00000641811 SNAPC2Q13487 334 aa20.9■□□□□ 0.94
PHGDH-227ENST00000641811 ZHX2Q9Y6X8 837 aa20.9■□□□□ 0.94
PHGDH-227ENST00000641811 MYH7P12883 1935 aa20.9■□□□□ 0.94
PHGDH-227ENST00000641811 CASP8AP2Q9UKL3 1982 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 MYH1P12882 1939 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 HLA-DOAP06340 250 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 NUCB1Q02818 461 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 EVX2Q03828 476 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 METTL16Q86W50 562 aaKnown RBP20.89■□□□□ 0.93
PHGDH-227ENST00000641811 CHD1LQ86WJ1 897 aa20.89■□□□□ 0.93
PHGDH-227ENST00000641811 FOXP4Q8IVH2 680 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-227ENST00000641811 CRACR2BQ8N4Y2 399 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-227ENST00000641811 RNF113AO15541 343 aaKnown RBP20.88■□□□□ 0.93
PHGDH-227ENST00000641811 ALDH1A1P00352 501 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 CETPP11597 493 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 CAP2P40123 477 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 PLCD1P51178 756 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 JAG1P78504 1218 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 SHROOM1Q2M3G4 852 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-227ENST00000641811 TNS4Q8IZW8 715 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 FAM43AQ8N2R8 423 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 DCP1AQ9NPI6 582 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-227ENST00000641811 KCNH4Q9UQ05 1017 aa20.88■□□□□ 0.93
PHGDH-227ENST00000641811 OTUD7BQ6GQQ9 843 aa20.87■□□□□ 0.93
PHGDH-227ENST00000641811 OSBP2Q969R2 916 aa20.87■□□□□ 0.93
PHGDH-227ENST00000641811 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
PHGDH-227ENST00000641811 DOCK1Q14185 1865 aa20.87■□□□□ 0.93
PHGDH-227ENST00000641811 BTBD19C9JJ37 291 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 POLR3DP05423 398 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-227ENST00000641811 CYP2D6P10635 497 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 CRHR2Q13324 411 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 TTC6Q86TZ1 520 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 FSD1Q9BTV5 496 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 CFHR5Q9BXR6 569 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 AFG3L2Q9Y4W6 797 aa20.86■□□□□ 0.93
PHGDH-227ENST00000641811 DDX60LQ5H9U9 1706 aaKnown RBP20.86■□□□□ 0.93
PHGDH-227ENST00000641811 GPR25O00155 361 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 GDF11O95390 407 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 MOGSQ13724 837 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 ZNF296Q8WUU4 475 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-227ENST00000641811 APPBP2Q92624 585 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 STRBPQ96SI9 672 aaKnown RBP20.85■□□□□ 0.93
PHGDH-227ENST00000641811 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 SLC4A4Q9Y6R1 1079 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 NAV1Q8NEY1 1877 aa20.85■□□□□ 0.93
PHGDH-227ENST00000641811 TRIM75PA6NK02 468 aa20.84■□□□□ 0.93
PHGDH-227ENST00000641811 M0R2C6 588 aa20.84■□□□□ 0.93
PHGDH-227ENST00000641811 CXCL11O14625 94 aa20.84■□□□□ 0.93
PHGDH-227ENST00000641811 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
PHGDH-227ENST00000641811 PLEKHM2Q8IWE5 1019 aa20.84■□□□□ 0.93
PHGDH-227ENST00000641811 EHD4Q9H223 541 aa20.84■□□□□ 0.93
PHGDH-227ENST00000641811 CYP2D7A0A087X1C5 515 aa20.83■□□□□ 0.93
PHGDH-227ENST00000641811 SMIM22K7EJ46 135 aa20.83■□□□□ 0.93
PHGDH-227ENST00000641811 TAF1CQ15572 869 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-227ENST00000641811 SEC62Q99442 399 aaKnown RBP20.83■□□□□ 0.93
PHGDH-227ENST00000641811 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
PHGDH-227ENST00000641811 PHIPQ8WWQ0 1821 aa20.83■□□□□ 0.92
PHGDH-227ENST00000641811 A0A0G2JLL6 359 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-227ENST00000641811 SPP2Q13103 211 aa20.82■□□□□ 0.92
PHGDH-227ENST00000641811 TATDN1Q6P1N9 297 aa20.82■□□□□ 0.92
PHGDH-227ENST00000641811 PRRT2Q7Z6L0 340 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-227ENST00000641811 ATAD5Q96QE3 1844 aa20.82■□□□□ 0.92
PHGDH-227ENST00000641811 USP17L5A8MUK1 530 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 USP17L12C9JPN9 530 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 USP17L21D6R901 530 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 GPAA1O43292 621 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 SHMT1P34896 483 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 GABPAQ06546 454 aa20.81■□□□□ 0.92
PHGDH-227ENST00000641811 LRRFIP1Q32MZ4 808 aaKnown RBP20.81■□□□□ 0.92
PHGDH-227ENST00000641811 GPAT2Q6NUI2 795 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms