RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 HPS5Q9UPZ3 1129 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 SALL1Q9NSC2 1324 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 MYBL2P10244 700 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 EVA1CP58658 441 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 NFXL1Q6ZNB6 911 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 RALYLQ86SE5 291 aaKnown RBP15.63■□□□□ 0.09
SCARB2-227ENST00000640957 EXOC5O00471 708 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 ZNF185O15231 689 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 TDO2P48775 406 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 GCKRQ14397 625 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 LRRC24Q50LG9 513 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 KAT14Q9H8E8 782 aa15.63■□□□□ 0.09
SCARB2-227ENST00000640957 HOOK1Q9UJC3 728 aaKnown RBP15.63■□□□□ 0.09
SCARB2-227ENST00000640957 BTBD18B2RXH4 712 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 KCNJ6P48051 423 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 DNA2P51530 1060 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 TADA2BQ86TJ2 420 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 ZKSCAN3Q9BRR0 538 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 NEURL1BA8MQ27 555 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 ERLIN2O94905 339 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 FGAP02671 866 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
SCARB2-227ENST00000640957 JPH2Q9BR39 696 aaPredicted RBP15.62■□□□□ 0.09
SCARB2-227ENST00000640957 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
SCARB2-227ENST00000640957 ATP1A2P50993 1020 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 KCTD16Q68DU8 428 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 PUS3Q9BZE2 481 aaKnown RBP15.62■□□□□ 0.09
SCARB2-227ENST00000640957 TUBE1Q9UJT0 475 aa15.62■□□□□ 0.09
SCARB2-227ENST00000640957 NRKQ7Z2Y5 1582 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 MYO1FO00160 1098 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 ZEB2O60315 1214 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 SYF2O95926 243 aaKnown RBP15.61■□□□□ 0.09
SCARB2-227ENST00000640957 NUP88Q99567 741 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-227ENST00000640957 CHP1Q99653 195 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 SLC26A6Q9BXS9 759 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 GEMIN8Q9NWZ8 242 aaKnown RBP15.61■□□□□ 0.09
SCARB2-227ENST00000640957 PSD3Q9NYI0 1048 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 SRCAPQ6ZRS2 3230 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 H0YHG0 523 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 TUBB4AP04350 444 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 TBX2Q13207 712 aaPredicted RBP15.61■□□□□ 0.09
SCARB2-227ENST00000640957 TEX2Q8IWB9 1127 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 KIRREL3Q8IZU9 778 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 CEP112Q8N8E3 955 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 BCAS4Q8TDM0 211 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 MMS19Q96T76 1030 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 HAUS7Q99871 368 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 SMARCAL1Q9NZC9 954 aa15.61■□□□□ 0.09
SCARB2-227ENST00000640957 RGPD8O14715 1765 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-227ENST00000640957 FRMD3A2A2Y4 597 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 SSBP05455 408 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCARB2-227ENST00000640957 GUCY1A2P33402 732 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 NR5A1Q13285 461 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 RRP12Q5JTH9 1297 aaKnown RBP15.6■□□□□ 0.09
SCARB2-227ENST00000640957 TTC39AQ5SRH9 613 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 ZNF274Q96GC6 653 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-227ENST00000640957 GPTP24298 496 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 ANTXR2P58335 489 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 PPARAQ07869 468 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 TRDNQ13061 729 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 POSTNQ15063 836 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 CAGE1Q8TC20 777 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 PALLDQ8WX93 1383 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 MAP9Q49MG5 647 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 BLZF1Q9H2G9 400 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 BABAM1Q9NWV8 329 aa15.6■□□□□ 0.09
SCARB2-227ENST00000640957 ZPR1O75312 459 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 SNRPA1P09661 255 aaKnown RBP15.59■□□□□ 0.09
SCARB2-227ENST00000640957 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
SCARB2-227ENST00000640957 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 FAM71BQ8TC56 605 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 NAPGQ99747 312 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-227ENST00000640957 PUS7LQ9H0K6 701 aaKnown RBP15.59■□□□□ 0.09
SCARB2-227ENST00000640957 FAM169AQ9Y6X4 670 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 B4E1Z4 1266 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 PPFIA4O75335 1185 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 EZH2Q15910 746 aaKnown RBP15.59■□□□□ 0.09
SCARB2-227ENST00000640957 TAB2Q9NYJ8 693 aa15.59■□□□□ 0.09
SCARB2-227ENST00000640957 GOLGA6L9A6NEM1 432 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 FAM205CA6NFA0 338 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 HOXB7P09629 217 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 ERCC3P19447 782 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 ADORA1P30542 326 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 METAP2P50579 478 aaKnown RBP eCLIP15.58■□□□□ 0.09
SCARB2-227ENST00000640957 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 RRP36Q96EU6 259 aaKnown RBP15.58■□□□□ 0.09
SCARB2-227ENST00000640957 CRACR2AQ9BSW2 395 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 SLC52A2Q9HAB3 445 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 CAPN7Q9Y6W3 813 aa15.58■□□□□ 0.09
SCARB2-227ENST00000640957 C3P01024 1663 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 ERVK-24P63145 666 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 ATL3Q6DD88 541 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 SH2D3CQ8N5H7 860 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 ATP2C2O75185 946 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 HNRNPH1P31943 449 aaKnown RBP15.58■□□□□ 0.08
SCARB2-227ENST00000640957 STIM1Q13586 685 aa15.58■□□□□ 0.08
SCARB2-227ENST00000640957 SCARF1Q14162 830 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms