RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 TCP10L2B9ZVM9 353 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 ORC4O43929 436 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 APPP05067 770 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 CYP2D6P10635 497 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 NT5C2P49902 561 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 STOX1Q6ZVD7 989 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 C16orf86Q6ZW13 317 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 TTC6Q86TZ1 520 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 LDHDQ86WU2 507 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 TBC1D10CQ8IV04 446 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 FOXP4Q8IVH2 680 aaPredicted RBP10.85□□□□□ -0.67
SCARB2-225ENST00000640900 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 STAG1Q8WVM7 1258 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 TMEM39BQ9GZU3 492 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 PI4KBQ9UBF8 816 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 SNX14Q9Y5W7 946 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 SSC5DA1L4H1 1573 aa10.85□□□□□ -0.67
SCARB2-225ENST00000640900 ZNF213O14771 459 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 KIF3CO14782 793 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 TDO2P48775 406 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 TNNI2P48788 182 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 TCP10Q12799 353 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 PICALMQ13492 652 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
SCARB2-225ENST00000640900 AKNAD1Q5T1N1 836 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 C22orf23Q9BZE7 217 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
SCARB2-225ENST00000640900 SAP30BPQ9UHR5 308 aaKnown RBP10.84□□□□□ -0.67
SCARB2-225ENST00000640900 E7EWF7 191 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 SHMT1P34896 483 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 NOVP48745 357 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 COL9A3Q14050 684 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-225ENST00000640900 RNF20Q5VTR2 975 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 TATDN1Q6P1N9 297 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
SCARB2-225ENST00000640900 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
SCARB2-225ENST00000640900 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
SCARB2-225ENST00000640900 PAPPA2Q9BXP8 1791 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 PHF20L1A8MW92 1017 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 MINDY4BA8MYZ0 360 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 POLR3DP05423 398 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 CDK8P49336 464 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 HAND2P61296 217 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 EXOSC10Q01780 885 aaKnown RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 CTDSPL2Q05D32 466 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 KRT32Q14532 448 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 ADCK5Q3MIX3 580 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 NBPF12Q5TAG4 269 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 CDC37L1Q7L3B6 337 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 KRT26Q7Z3Y9 468 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 MB21D2Q8IYB1 491 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 FBXL16Q8N461 479 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 DYNLL2Q96FJ2 89 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 CSRNP1Q96S65 589 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 RNF41Q9H4P4 317 aaPredicted RBP10.82□□□□□ -0.68
SCARB2-225ENST00000640900 ZSWIM6Q9HCJ5 1215 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 NEDD4P46934 1319 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 WDR19Q8NEZ3 1342 aa10.82□□□□□ -0.68
SCARB2-225ENST00000640900 PLIN4Q96Q06 1357 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 ADM5C9JUS6 153 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 HLA-DOAP06340 250 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 SLURP2P0DP57 97 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 ZKSCAN1P17029 563 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 RASA1P20936 1047 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 MCCP23508 829 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 AMOTL1Q8IY63 956 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 SLC44A5Q8NCS7 719 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 MTA3Q9BTC8 594 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 ALDH8A1Q9H2A2 487 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 INCENPQ9NQS7 918 aa10.81□□□□□ -0.68
SCARB2-225ENST00000640900 SCAF8Q9UPN6 1271 aaKnown RBP10.81□□□□□ -0.68
SCARB2-225ENST00000640900 IGKV6D-41A0A0C4DH26 115 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 SLC3A2P08195 630 aaKnown RBP10.8□□□□□ -0.68
SCARB2-225ENST00000640900 ANTXR2P58335 489 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 PDE4BQ07343 736 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 SUPT20HL1Q3ZLR7 823 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 EAPPQ56P03 285 aaPredicted RBP10.8□□□□□ -0.68
SCARB2-225ENST00000640900 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 DLK2Q6UY11 383 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 MFSD6Q6ZSS7 791 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 USP48Q86UV5 1035 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 ANKS1AQ92625 1134 aa10.8□□□□□ -0.68
SCARB2-225ENST00000640900 HOOK2Q96ED9 719 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms