RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 FOXP1Q9H334 677 aaPredicted RBP6.32□□□□□ -1.4
SCN3A-210ENST00000640652 PLCH1Q4KWH8 1693 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 UBE3CQ15386 1083 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 IL25Q9H293 177 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 NRBP1Q9UHY1 535 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 STX10O60499 249 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CCDC181Q5TID7 509 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 KRT40Q6A162 431 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CERS3Q8IU89 383 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 ANKRD7Q92527 254 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CRNKL1Q9BZJ0 848 aaKnown RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CPDO75976 1380 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 KRT86O43790 486 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 RANBP6O60518 1105 aaKnown RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 PPFIA3O75145 1194 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 AXDND1Q5T1B0 1012 aaPredicted RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 TCP11L1Q9NUJ3 509 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 SLC4A4Q9Y6R1 1079 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 PCCAP05165 728 aaPredicted RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 RESP18Q5W5W9 173 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 ISM2Q6H9L7 571 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CYP26C1Q6V0L0 522 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 FBXL16Q8N461 479 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 LPIN2Q92539 896 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 EDC3Q96F86 508 aaKnown RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 C1orf167Q5SNV9 1468 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 MAP3K15Q6ZN16 1313 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 PNOCQ13519 176 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CHRNA2Q15822 529 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 KRBA2Q6ZNG9 492 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 IGSF22Q8N9C0 903 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 SPATA5Q8NB90 893 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 PGBD1Q96JS3 809 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 ZNF532Q9HCE3 1301 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 ATP8B1O43520 1251 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 USO1O60763 962 aaKnown RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 EVCP57679 992 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 ETF1P62495 437 aaKnown RBP6.31□□□□□ -1.4
SCN3A-210ENST00000640652 FUCA2Q9BTY2 467 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 NFE2L3Q9Y4A8 694 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 MYO10Q9HD67 2058 aa6.31□□□□□ -1.4
SCN3A-210ENST00000640652 CTAGE15A4D2H0 777 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 PSMA7O14818 248 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 CTAGE8P0CG41 777 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 KRT83P78385 493 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 CTAGE6Q86UF2 777 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 CTAGE4Q8IX94 777 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 RPGRIP1Q96KN7 1286 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 MYO1AQ9UBC5 1043 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 SHANK3Q9BYB0 1731 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 COL14A1Q05707 1796 aaKnown RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 LIFRP42702 1097 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 RABGGTAQ92696 567 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 SLX4Q8IY92 1834 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 GPTP24298 496 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 GNAQP50148 359 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 BRD3Q15059 726 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 TMEM266Q2M3C6 531 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 RAB11FIP4Q86YS3 637 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 PHKBQ93100 1093 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 FAM89AQ96GI7 184 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 DDX41Q9UJV9 622 aaKnown RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 MEGF6O75095 1541 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 FOCADQ5VW36 1801 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 APOA5Q6Q788 366 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 TMTC1Q8IUR5 882 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 PDE6AP16499 860 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 PPP1R2P41236 205 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 PLCD1P51178 756 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 IQCB1Q15051 598 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 DZIP1Q86YF9 867 aaKnown RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 VSTM4Q8IW00 320 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 CITO14578 2027 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 KDM6AO15550 1401 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 B4E1Z4 1266 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 AKNAD1Q5T1N1 836 aa6.3□□□□□ -1.4
SCN3A-210ENST00000640652 XIRP1Q702N8 1843 aaKnown RBP6.3□□□□□ -1.4
SCN3A-210ENST00000640652 MAGEB6P1A0A0J9YX57 407 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 USP8P40818 1118 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 UBA7P41226 1012 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 SEC62Q99442 399 aaKnown RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 WDR17Q8IZU2 1322 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 PDE8AO60658 829 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 MBD4O95243 580 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CYLC1P35663 651 aaPredicted RBP6.29□□□□□ -1.4
SCN3A-210ENST00000640652 GSTO1P78417 241 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 UBXN1Q04323 297 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 CTR9Q6PD62 1173 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 TSC1Q92574 1164 aa6.29□□□□□ -1.4
SCN3A-210ENST00000640652 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms