RNA–Protein interactions for RNA: ENST00000639871.1

VPS51-217, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5 BASIC

Gene VPS51, Length 243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-217ENST00000639871 SH3TC2Q8TF17 1288 aa21.53■■□□□ 1.04
VPS51-217ENST00000639871 TMEM106CQ9BVX2 250 aa21.53■■□□□ 1.04
VPS51-217ENST00000639871 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
VPS51-217ENST00000639871 PIH1D3Q9NQM4 214 aaKnown RBP21.53■■□□□ 1.04
VPS51-217ENST00000639871 AATFQ9NY61 560 aaKnown RBP eCLIP21.53■■□□□ 1.04
VPS51-217ENST00000639871 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
VPS51-217ENST00000639871 DOCK1Q14185 1865 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 CAP2P40123 477 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 CCDC84Q86UT8 332 aaPredicted RBP21.52■■□□□ 1.04
VPS51-217ENST00000639871 PANK1Q8TE04 598 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 TBC1D2Q9BYX2 928 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 CCDC8Q9H0W5 538 aaPredicted RBP21.52■■□□□ 1.04
VPS51-217ENST00000639871 PI4KBQ9UBF8 816 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 AGTPBP1Q9UPW5 1226 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
VPS51-217ENST00000639871 TRIM75PA6NK02 468 aa21.51■■□□□ 1.03
VPS51-217ENST00000639871 HOXD10P28358 340 aa21.51■■□□□ 1.03
VPS51-217ENST00000639871 FMNL1O95466 1100 aaPredicted RBP21.5■■□□□ 1.03
VPS51-217ENST00000639871 GADL1Q6ZQY3 521 aa21.5■■□□□ 1.03
VPS51-217ENST00000639871 PROCA1Q8NCQ7 364 aaPredicted RBP21.5■■□□□ 1.03
VPS51-217ENST00000639871 NOL10Q9BSC4 688 aaKnown RBP21.5■■□□□ 1.03
VPS51-217ENST00000639871 MAST2Q6P0Q8 1798 aa21.5■■□□□ 1.03
VPS51-217ENST00000639871 FLT1P17948 1338 aa21.5■■□□□ 1.03
VPS51-217ENST00000639871 FCGRTP55899 365 aa21.49■■□□□ 1.03
VPS51-217ENST00000639871 SPP2Q13103 211 aa21.49■■□□□ 1.03
VPS51-217ENST00000639871 ZNF280CQ8ND82 737 aa21.49■■□□□ 1.03
VPS51-217ENST00000639871 DNAJC18Q9H819 358 aa21.49■■□□□ 1.03
VPS51-217ENST00000639871 PTPRFP10586 1907 aa21.49■■□□□ 1.03
VPS51-217ENST00000639871 SH3D19Q5HYK7 790 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 TREML2Q5T2D2 321 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 TMED8Q6PL24 325 aaPredicted RBP21.48■■□□□ 1.03
VPS51-217ENST00000639871 ERC1Q8IUD2 1116 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 FOXP4Q8IVH2 680 aaPredicted RBP21.48■■□□□ 1.03
VPS51-217ENST00000639871 TGFBRAP1Q8WUH2 860 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 EXOC6BQ9Y2D4 811 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 MYPNQ86TC9 1320 aa21.48■■□□□ 1.03
VPS51-217ENST00000639871 USP17L5A8MUK1 530 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 GRK4P32298 578 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 PRKCZQ05513 592 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 SLC4A8Q2Y0W8 1093 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 MAPKAPK5Q8IW41 473 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 WDR18Q9BV38 432 aa21.47■■□□□ 1.03
VPS51-217ENST00000639871 SIPA1L1O43166 1804 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 ECM2O94769 699 aaPredicted RBP21.46■■□□□ 1.03
VPS51-217ENST00000639871 MS4A1P11836 297 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 JAG1P78504 1218 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 MTFR1Q15390 333 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 RAET1EQ8TD07 263 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
VPS51-217ENST00000639871 CYP7A1P22680 504 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 DYNLL1P63167 89 aaKnown RBP21.45■■□□□ 1.02
VPS51-217ENST00000639871 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 CERS3Q8IU89 383 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 RPAP2Q8IXW5 612 aaPredicted RBP21.45■■□□□ 1.02
VPS51-217ENST00000639871 SMCR8Q8TEV9 937 aaPredicted RBP21.45■■□□□ 1.02
VPS51-217ENST00000639871 ANTXR1Q9H6X2 564 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 GINM1Q9NU53 330 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 PALD1Q9ULE6 856 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
VPS51-217ENST00000639871 MYCP01106 439 aaPredicted RBP21.44■■□□□ 1.02
VPS51-217ENST00000639871 ASNSP08243 561 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 HMGCS2P54868 508 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 FAM110CQ1W6H9 321 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 AACSQ86V21 672 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 RHPN1Q8TCX5 695 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 SHISA4Q96DD7 197 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 PNMA3Q9UL41 463 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 NDUFB9Q9Y6M9 179 aa21.44■■□□□ 1.02
VPS51-217ENST00000639871 IDH1O75874 414 aaKnown RBP21.43■■□□□ 1.02
VPS51-217ENST00000639871 IRF5Q13568 498 aa21.43■■□□□ 1.02
VPS51-217ENST00000639871 SLAIN1Q8ND83 568 aa21.43■■□□□ 1.02
VPS51-217ENST00000639871 AS3MTQ9HBK9 375 aa21.43■■□□□ 1.02
VPS51-217ENST00000639871 LOC285556D6RIA3 1793 aa21.43■■□□□ 1.02
VPS51-217ENST00000639871 GJB1P08034 283 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 GCLCP48506 637 aaPredicted RBP21.42■■□□□ 1.02
VPS51-217ENST00000639871 FLT3LGP49771 235 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 BACE1P56817 501 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 ANKRD13CQ8N6S4 541 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 MAGEB6Q8N7X4 407 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 PXYLP1Q8TE99 480 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
VPS51-217ENST00000639871 FOCADQ5VW36 1801 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 HOXA7P31268 230 aaPredicted RBP21.41■■□□□ 1.02
VPS51-217ENST00000639871 GJA8P48165 433 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 MAP3K12Q12852 859 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 PABPC4Q13310 644 aaKnown RBP eCLIP21.41■■□□□ 1.02
VPS51-217ENST00000639871 SHROOM1Q2M3G4 852 aaPredicted RBP21.41■■□□□ 1.02
VPS51-217ENST00000639871 UBE2Q1Q7Z7E8 422 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 MIGA1Q8NAN2 632 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.41■■□□□ 1.02
VPS51-217ENST00000639871 RIOK1Q9BRS2 568 aaKnown RBP21.41■■□□□ 1.02
VPS51-217ENST00000639871 ASCC2Q9H1I8 757 aaPredicted RBP21.41■■□□□ 1.02
VPS51-217ENST00000639871 IL1RAPL2Q9NP60 686 aa21.41■■□□□ 1.02
VPS51-217ENST00000639871 MYO5AQ9Y4I1 1855 aaKnown RBP21.41■■□□□ 1.02
VPS51-217ENST00000639871 TNPO2O14787 897 aaKnown RBP21.4■■□□□ 1.02
VPS51-217ENST00000639871 CCL5P13501 91 aa21.4■■□□□ 1.02
VPS51-217ENST00000639871 MTMR2Q13614 643 aa21.4■■□□□ 1.02
VPS51-217ENST00000639871 TATDN1Q6P1N9 297 aa21.4■■□□□ 1.02
VPS51-217ENST00000639871 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms