RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 PPP4CP60510 307 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 EZH2Q15910 746 aaKnown RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 FAM47AQ5JRC9 791 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 ATL3Q6DD88 541 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 IQCA1Q86XH1 822 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 MPNDQ8N594 471 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 TGFBRAP1Q8WUH2 860 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 MROH7-TTC4A0A0A0MT08 1334 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 KIF28PB7ZC32 967 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 GTF2IP78347 998 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 IFIT1BQ5T764 474 aaKnown RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 KRT40Q6A162 431 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 BICD2Q8TD16 824 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 ANO8Q9HCE9 1232 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-230ENST00000639083 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
TARDBP-230ENST00000639083 ORC4O43929 436 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 NMT2O60551 498 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 FMNL1O95466 1100 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-230ENST00000639083 GUCY1A2P33402 732 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 PDE4BQ07343 736 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 CAMK4Q16566 473 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 C12orf60Q5U649 245 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.43e-23■□□□□ 9.1
TARDBP-230ENST00000639083 ZC3H12CQ9C0D7 883 aaKnown RBP12.54□□□□□ -0.4
TARDBP-230ENST00000639083 NID2Q14112 1375 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 CCDC88AQ3V6T2 1871 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 NR1I2O75469 434 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 BTDP43251 543 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-230ENST00000639083 BRAPQ7Z569 592 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 NBPF11Q86T75 865 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 CRACR2BQ8N4Y2 399 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-230ENST00000639083 DUOX1Q9NRD9 1551 aa12.54□□□□□ -0.4
TARDBP-230ENST00000639083 RCAN1P53805 252 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 SLC15A2Q16348 729 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 MAPKAPK5Q8IW41 473 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 TBC1D22AQ8WUA7 517 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 DYNLL2Q96FJ2 89 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 STK36Q9NRP7 1315 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 GPR75-ASB3A0A0A6YYF3 556 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 TRIM29Q14134 588 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 DOK7Q18PE1 504 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 TRIM22Q8IYM9 498 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
TARDBP-230ENST00000639083 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
TARDBP-230ENST00000639083 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.4
TARDBP-230ENST00000639083 ME1P48163 572 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 PLCD1P51178 756 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 TROAPQ12815 778 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 LINC00301Q8NCQ3 95 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-230ENST00000639083 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-230ENST00000639083 SAP30BPQ9UHR5 308 aaKnown RBP12.52□□□□□ -0.41
TARDBP-230ENST00000639083 MAST2Q6P0Q8 1798 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.41
TARDBP-230ENST00000639083 GNL2Q13823 731 aaKnown RBP12.51□□□□□ -0.41
TARDBP-230ENST00000639083 WASF1Q92558 559 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 F8W031 263 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-230ENST00000639083 TFAP4Q01664 338 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 CCAR1Q8IX12 1150 aaKnown RBP12.51□□□□□ -0.41
TARDBP-230ENST00000639083 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 TEX11Q8IYF3 940 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
TARDBP-230ENST00000639083 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 PCDHA7Q9UN72 937 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
TARDBP-230ENST00000639083 H0YIN7 160 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 DEXIO95424 95 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 U2AF2P26368 475 aaKnown RBP eCLIP12.5□□□□□ -0.413e-10■□□□□ 10
TARDBP-230ENST00000639083 RHBDL3P58872 404 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 STK38Q15208 465 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 AMOTL1Q8IY63 956 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
TARDBP-230ENST00000639083 SLC44A5Q8NCS7 719 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms