RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
SPIN3-219ENST00000639053 CNNM2Q9H8M5 875 aa17.91■□□□□ 0.46
SPIN3-219ENST00000639053 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
SPIN3-219ENST00000639053 WDR33Q9C0J8 1336 aaKnown RBP17.9■□□□□ 0.46
SPIN3-219ENST00000639053 FOCADQ5VW36 1801 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 KDM4AO75164 1064 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 RPS12P25398 132 aaKnown RBP17.9■□□□□ 0.46
SPIN3-219ENST00000639053 PLCD1P51178 756 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 GPR162Q16538 588 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 AMOTL1Q8IY63 956 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 DYNLL2Q96FJ2 89 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 KRT23Q9C075 422 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 GPHNQ9NQX3 736 aaPredicted RBP17.9■□□□□ 0.46
SPIN3-219ENST00000639053 RNF181Q9P0P0 153 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.9■□□□□ 0.46
SPIN3-219ENST00000639053 SBF1O95248 1867 aa17.9■□□□□ 0.46
SPIN3-219ENST00000639053 PRDM1O75626 825 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 FGRP09769 529 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 PDIA4P13667 645 aaKnown RBP17.89■□□□□ 0.45
SPIN3-219ENST00000639053 ECM29Q5VYK3 1845 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 LARGE1O95461 756 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
SPIN3-219ENST00000639053 FGD1P98174 961 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 MCTP1Q6DN14 999 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 ZFPM1Q8IX07 1006 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 MTMR14Q8NCE2 650 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 BRF1Q92994 677 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 OSBPL5Q9H0X9 879 aaPredicted RBP17.89■□□□□ 0.45
SPIN3-219ENST00000639053 FAM198AQ9UFP1 575 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
SPIN3-219ENST00000639053 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
SPIN3-219ENST00000639053 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 ZNF280AP59817 542 aaPredicted RBP17.88■□□□□ 0.45
SPIN3-219ENST00000639053 TCP10Q12799 353 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 IDI2Q9BXS1 227 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 AGXT2Q9BYV1 514 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 MYOZ2Q9NPC6 264 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 ZSWIM5Q9P217 1185 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 ROBO3Q96MS0 1386 aa17.88■□□□□ 0.45
SPIN3-219ENST00000639053 WDR19Q8NEZ3 1342 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 ORC4O43929 436 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 C9orf131Q5VYM1 1079 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 MICALL2Q8IY33 904 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 DPF2Q92785 391 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
SPIN3-219ENST00000639053 LMBRD1Q9NUN5 540 aa17.87■□□□□ 0.45
SPIN3-219ENST00000639053 MYH1P12882 1939 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 PCP11498 1178 aaKnown RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 PDE4BQ07343 736 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 ME3Q16798 604 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 ESR2Q92731 530 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 ZNF70Q9UC06 446 aaPredicted RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 CNOT7Q9UIV1 285 aaKnown RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 EGFRP00533 1210 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 GZF1Q9H116 711 aaPredicted RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
SPIN3-219ENST00000639053 DDX49Q9Y6V7 483 aaKnown RBP17.86■□□□□ 0.45
SPIN3-219ENST00000639053 WNT10BO00744 389 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 SH2B2O14492 632 aaPredicted RBP17.85■□□□□ 0.45
SPIN3-219ENST00000639053 RANBP6O60518 1105 aaKnown RBP17.85■□□□□ 0.45
SPIN3-219ENST00000639053 NBPF9Q3BBW0 867 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 TTC6Q86TZ1 520 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 GPC2Q8N158 579 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 FBXL16Q8N461 479 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 ZKSCAN3Q9BRR0 538 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 TMOD2Q9NZR1 351 aa17.85■□□□□ 0.45
SPIN3-219ENST00000639053 TCP10L2B9ZVM9 353 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
SPIN3-219ENST00000639053 MMP14P50281 582 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 C16orf86Q6ZW13 317 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 SH3BP5LQ7L8J4 393 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 SAMD7Q7Z3H4 446 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 NECAB1Q8N987 351 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 IGDCC4Q8TDY8 1250 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 TMEM87BQ96K49 555 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 DDTLA6NHG4 134 aaPredicted RBP17.84■□□□□ 0.45
SPIN3-219ENST00000639053 IFIT3O14879 490 aaKnown RBP17.84■□□□□ 0.45
SPIN3-219ENST00000639053 CDK8P49336 464 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 MRE11P49959 708 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 ST3GAL1Q11201 340 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
SPIN3-219ENST00000639053 TMEM67Q5HYA8 995 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 MKNK2Q9HBH9 465 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 SENP2Q9HC62 589 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 BRPF3Q9ULD4 1205 aa17.84■□□□□ 0.45
SPIN3-219ENST00000639053 ENTPD3O75355 529 aa17.83■□□□□ 0.44
SPIN3-219ENST00000639053 DDNO94850 711 aaPredicted RBP17.83■□□□□ 0.44
SPIN3-219ENST00000639053 STK3Q13188 491 aa17.83■□□□□ 0.44
SPIN3-219ENST00000639053 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.44
SPIN3-219ENST00000639053 LY9Q9HBG7 655 aa17.83■□□□□ 0.44
SPIN3-219ENST00000639053 ANGEL1Q9UNK9 670 aaKnown RBP17.83■□□□□ 0.44
SPIN3-219ENST00000639053 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
SPIN3-219ENST00000639053 MBD3O95983 291 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms