RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ADAM17P78536 824 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 SWI5Q1ZZU3 235 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 RALGPS1Q5JS13 557 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 XKR5Q6UX68 686 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 ZFPM1Q8IX07 1006 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 TTC16Q8NEE8 873 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 WDR89Q96FK6 387 aaPredicted RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 SIGLEC10Q96LC7 697 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 DNAJC25Q9H1X3 360 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 LUC7LQ9NQ29 371 aaKnown RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 PRDM10Q9NQV6 1147 aa3.04□□□□□ -1.92
LMBR1-222ENST00000638959 CNOT11Q9UKZ1 510 aaKnown RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 MAFBQ9Y5Q3 323 aaPredicted RBP3.04□□□□□ -1.92
LMBR1-222ENST00000638959 CILPO75339 1184 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 NEFMP07197 916 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 PDE6BP35913 854 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 HNRNPUQ00839 825 aaKnown RBP eCLIP3.03□□□□□ -1.92
LMBR1-222ENST00000638959 MCM6Q14566 821 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 C8orf34Q49A92 452 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 ISL2Q96A47 359 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 PRIMPOLQ96LW4 560 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 MKNK1Q9BUB5 465 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 ZC3H12CQ9C0D7 883 aaKnown RBP3.03□□□□□ -1.92
LMBR1-222ENST00000638959 PRDM5Q9NQX1 630 aaPredicted RBP3.03□□□□□ -1.92
LMBR1-222ENST00000638959 LATS2Q9NRM7 1088 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 STIM2Q9P246 746 aa3.03□□□□□ -1.92
LMBR1-222ENST00000638959 TFIP11Q9UBB9 837 aaKnown RBP3.03□□□□□ -1.92
LMBR1-222ENST00000638959 CYR61O00622 381 aa3.02□□□□□ -1.93
LMBR1-222ENST00000638959 B3GALT4O96024 378 aa3.02□□□□□ -1.93
LMBR1-222ENST00000638959 AP3B2Q13367 1082 aa3.02□□□□□ -1.93
LMBR1-222ENST00000638959 NAA30Q147X3 362 aaPredicted RBP3.02□□□□□ -1.93
LMBR1-222ENST00000638959 ATCAYQ86WG3 371 aa3.02□□□□□ -1.93
LMBR1-222ENST00000638959 INTS4Q96HW7 963 aaKnown RBP3.02□□□□□ -1.93
LMBR1-222ENST00000638959 ARXQ96QS3 562 aa3.02□□□□□ -1.93
LMBR1-222ENST00000638959 CCDC86Q9H6F5 360 aaKnown RBP3.02□□□□□ -1.93
LMBR1-222ENST00000638959 PHACTR2O75167 634 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 PCSK2P16519 638 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 TACR2P21452 398 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 SPRED3Q2MJR0 410 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 UBXN11Q5T124 520 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 PEAR1Q5VY43 1037 aaPredicted RBP3.01□□□□□ -1.93
LMBR1-222ENST00000638959 MFSD4AQ8N468 514 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 EDEM1Q92611 657 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 NAF1Q96HR8 494 aaKnown RBP3.01□□□□□ -1.93
LMBR1-222ENST00000638959 C19orf44Q9H6X5 657 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 ZNF552Q9H707 407 aaPredicted RBP3.01□□□□□ -1.93
LMBR1-222ENST00000638959 MAPK8IP1Q9UQF2 711 aa3.01□□□□□ -1.93
LMBR1-222ENST00000638959 A0A1W2PP55 124 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 PRR33A8MZF0 331 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 ZNF862O60290 1169 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 PRMT3O60678 531 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 GRIA4P48058 902 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 DNM1Q05193 864 aaKnown RBP3□□□□□ -1.93
LMBR1-222ENST00000638959 KANK4Q5T7N3 995 aaPredicted RBP3□□□□□ -1.93
LMBR1-222ENST00000638959 LILRA2Q8N149 483 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 FAM200AQ8TCP9 573 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 GGNBP2Q9H3C7 697 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 SMPD4Q9NXE4 827 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 PCDHGC5Q9Y5F6 944 aa3□□□□□ -1.93
LMBR1-222ENST00000638959 EOMESO95936 686 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 KIF4BQ2VIQ3 1234 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 THAP5Q7Z6K1 395 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 SNX29Q8TEQ0 813 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 UBE2FQ969M7 185 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 ADAMTS10Q9H324 1103 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 CWC22Q9HCG8 908 aaKnown RBP2.99□□□□□ -1.93
LMBR1-222ENST00000638959 ZSWIM5Q9P217 1185 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 AMOTL2Q9Y2J4 779 aa2.99□□□□□ -1.93
LMBR1-222ENST00000638959 EPHB3P54753 998 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 FGD1P98174 961 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 CNKSR3Q6P9H4 555 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 CAPN12Q6ZSI9 719 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 USP51Q70EK9 711 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 CCNJLQ8IV13 435 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 LINC01356Q8N9X3 169 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 POM121Q96HA1 1249 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 ZNF576Q9H609 170 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 VRTNQ9H8Y1 702 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 LIN7BQ9HAP6 207 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 EPB41L4AQ9HCS5 686 aaPredicted RBP2.98□□□□□ -1.93
LMBR1-222ENST00000638959 MBD1Q9UIS9 605 aaPredicted RBP2.98□□□□□ -1.93
LMBR1-222ENST00000638959 YBX2Q9Y2T7 364 aaKnown RBP2.98□□□□□ -1.93
LMBR1-222ENST00000638959 ST14Q9Y5Y6 855 aa2.98□□□□□ -1.93
LMBR1-222ENST00000638959 C1QTNF3-AMACRE9PGA6 284 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 TNFRSF21O75509 655 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 PDGFAP04085 211 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 KCNC1P48547 511 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 SRSF3P84103 164 aaKnown RBP2.97□□□□□ -1.93
LMBR1-222ENST00000638959 HNRNPA0Q13151 305 aaKnown RBP2.97□□□□□ -1.93
LMBR1-222ENST00000638959 TIGD5Q53EQ6 642 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 ZFYVE27Q5T4F4 411 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 CPZQ66K79 652 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 OXR1Q8N573 874 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 RNF214Q8ND24 703 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 PDZD8Q8NEN9 1154 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 SIRT5Q9NXA8 310 aa2.97□□□□□ -1.93
LMBR1-222ENST00000638959 FOXD3Q9UJU5 478 aaPredicted RBP2.97□□□□□ -1.93
LMBR1-222ENST00000638959 ZNF777Q9ULD5 760 aaPredicted RBP2.97□□□□□ -1.93
LMBR1-222ENST00000638959 TPX2Q9ULW0 747 aaKnown RBP2.97□□□□□ -1.93
LMBR1-222ENST00000638959 N4BP3O15049 544 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms