RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
ATM-226ENST00000638443 DBNDD1Q9H9R9 158 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 LAMB1P07942 1786 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 TCHHQ07283 1943 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 MROH7-TTC4A0A0A0MT08 1334 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 H0YIN7 160 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 IFIT3O14879 490 aaKnown RBP11.59□□□□□ -0.55
ATM-226ENST00000638443 TRIM66O15016 1216 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 ADD1P35611 737 aaKnown RBP11.59□□□□□ -0.55
ATM-226ENST00000638443 SPTY2D1Q68D10 685 aaPredicted RBP11.59□□□□□ -0.55
ATM-226ENST00000638443 OTUD7BQ6GQQ9 843 aa11.59□□□□□ -0.55
ATM-226ENST00000638443 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
ATM-226ENST00000638443 WDR19Q8NEZ3 1342 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 MYH2Q9UKX2 1941 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 BTDP43251 543 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.56
ATM-226ENST00000638443 NFXL1Q6ZNB6 911 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 USP48Q86UV5 1035 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 FAM184AQ8NB25 1140 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 MCM9Q9NXL9 1143 aa11.58□□□□□ -0.56
ATM-226ENST00000638443 NMT2O60551 498 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 MAPKAPK5Q8IW41 473 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 TGFBRAP1Q8WUH2 860 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 PHKBQ93100 1093 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 AIFM3Q96NN9 605 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 KRT23Q9C075 422 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 ZC3H12CQ9C0D7 883 aaKnown RBP11.57□□□□□ -0.56
ATM-226ENST00000638443 CNNM2Q9H8M5 875 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
ATM-226ENST00000638443 ANAPC4Q9UJX5 808 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 STK25O00506 426 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 METAP2P50579 478 aaKnown RBP eCLIP11.57□□□□□ -0.56
ATM-226ENST00000638443 FAM47AQ5JRC9 791 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 CMTR1Q8N1G2 835 aaKnown RBP11.57□□□□□ -0.56
ATM-226ENST00000638443 TMEM87BQ96K49 555 aa11.57□□□□□ -0.56
ATM-226ENST00000638443 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
ATM-226ENST00000638443 MKRN1Q9UHC7 482 aaKnown RBP11.57□□□□□ -0.56
ATM-226ENST00000638443 TNKSO95271 1327 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 NAV1Q8NEY1 1877 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 RANBP6O60518 1105 aaKnown RBP11.56□□□□□ -0.56
ATM-226ENST00000638443 PDCP20941 246 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 USP5P45974 858 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 SCNN1DP51172 638 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 SLC44A5Q8NCS7 719 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 FTOQ9C0B1 505 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATM-226ENST00000638443 COA1Q9GZY4 146 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 FAM217BQ9NTX9 383 aaPredicted RBP11.56□□□□□ -0.56
ATM-226ENST00000638443 SNED1Q8TER0 1413 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 ECM29Q5VYK3 1845 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 H3BQV1 296 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 CPLX1O14810 134 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 RESTQ13127 1097 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 STYK1Q6J9G0 422 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 SGMS1Q86VZ5 419 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 RNF41Q9H4P4 317 aaPredicted RBP11.56□□□□□ -0.56
ATM-226ENST00000638443 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 TMEM63CQ9P1W3 806 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATM-226ENST00000638443 DAGLAQ9Y4D2 1042 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 PCDHAC2Q9Y5I4 1007 aa11.56□□□□□ -0.56
ATM-226ENST00000638443 CDK5RAP2Q96SN8 1893 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 SCN9AQ15858 1988 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 ZBTB43O43298 467 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 C21orf2O43822 256 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 PLCD1P51178 756 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 RHBDL3P58872 404 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 HMGN5P82970 282 aaKnown RBP11.55□□□□□ -0.56
ATM-226ENST00000638443 WTAPQ15007 396 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 AOC3Q16853 763 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 GAS2L3Q86XJ1 694 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 ENAHQ8N8S7 591 aaPredicted RBP11.55□□□□□ -0.56
ATM-226ENST00000638443 ESR2Q92731 530 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 ARPP21Q9UBL0 812 aaPredicted RBP11.55□□□□□ -0.56
ATM-226ENST00000638443 SLC12A7Q9Y666 1083 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 SRCAPQ6ZRS2 3230 aa11.55□□□□□ -0.56
ATM-226ENST00000638443 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
ATM-226ENST00000638443 LIFRP42702 1097 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 GSTO1P78417 241 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 SEC23AQ15436 765 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
ATM-226ENST00000638443 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
ATM-226ENST00000638443 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
ATM-226ENST00000638443 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 PTMSP20962 102 aa11.54□□□□□ -0.56
ATM-226ENST00000638443 NTRK3Q16288 839 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms