RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 HOOK2Q96ED9 719 aa23.17■■□□□ 1.3
HLA-A-209ENST00000638375 GBA2Q9HCG7 927 aaPredicted RBP23.17■■□□□ 1.3
HLA-A-209ENST00000638375 MINDY4BA8MYZ0 360 aa23.16■■□□□ 1.3
HLA-A-209ENST00000638375 USP2O75604 605 aaPredicted RBP23.16■■□□□ 1.3
HLA-A-209ENST00000638375 GABPAQ06546 454 aa23.16■■□□□ 1.3
HLA-A-209ENST00000638375 FOXP4Q8IVH2 680 aaPredicted RBP23.16■■□□□ 1.3
HLA-A-209ENST00000638375 AMOTL1Q8IY63 956 aa23.16■■□□□ 1.3
HLA-A-209ENST00000638375 DYNLL2Q96FJ2 89 aa23.16■■□□□ 1.3
HLA-A-209ENST00000638375 SERPINB13Q9UIV8 391 aa23.16■■□□□ 1.3
HLA-A-209ENST00000638375 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 PPP1R12BO60237 982 aaPredicted RBP23.15■■□□□ 1.3
HLA-A-209ENST00000638375 PPARAQ07869 468 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 MAP3K11Q16584 847 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 KIAA1211Q6ZU35 1233 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 ZNF341Q9BYN7 854 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
HLA-A-209ENST00000638375 ANO2Q9NQ90 1003 aa23.15■■□□□ 1.3
HLA-A-209ENST00000638375 HERC5Q9UII4 1024 aaKnown RBP23.15■■□□□ 1.3
HLA-A-209ENST00000638375 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.3
HLA-A-209ENST00000638375 LAMB1P07942 1786 aa23.14■■□□□ 1.3
HLA-A-209ENST00000638375 TTLL12Q14166 644 aaPredicted RBP23.14■■□□□ 1.29
HLA-A-209ENST00000638375 CRACR2BQ8N4Y2 399 aaPredicted RBP23.14■■□□□ 1.29
HLA-A-209ENST00000638375 MAP4K1Q92918 833 aa23.14■■□□□ 1.29
HLA-A-209ENST00000638375 KLRG1Q96E93 195 aa23.14■■□□□ 1.29
HLA-A-209ENST00000638375 ANGEL1Q9UNK9 670 aaKnown RBP23.14■■□□□ 1.29
HLA-A-209ENST00000638375 PHF20L1A8MW92 1017 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 APLP1P51693 650 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 FKBP1BP68106 108 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 C8orf34Q49A92 452 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 C2orf69Q8N8R5 385 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 SLC44A5Q8NCS7 719 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 ZNF112Q9UJU3 913 aa23.13■■□□□ 1.29
HLA-A-209ENST00000638375 TMEM88BA6NKF7 163 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 UBE2Q2LH0YL09 131 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 C1QTNF8P60827 252 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 HAND2P61296 217 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 RRP1BQ14684 758 aaKnown RBP23.12■■□□□ 1.29
HLA-A-209ENST00000638375 C16orf86Q6ZW13 317 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 ARMC9Q7Z3E5 817 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 STK11IPQ8N1F8 1099 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.12■■□□□ 1.292e-15■■■□□ 16.8
HLA-A-209ENST00000638375 TRIM34Q9BYJ4 488 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 NBPF3Q9H094 633 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 ANAPC4Q9UJX5 808 aa23.12■■□□□ 1.29
HLA-A-209ENST00000638375 SHMT1P34896 483 aa23.11■■□□□ 1.29
HLA-A-209ENST00000638375 IREB2P48200 963 aaKnown RBP23.11■■□□□ 1.29
HLA-A-209ENST00000638375 CTDSPL2Q05D32 466 aa23.11■■□□□ 1.29
HLA-A-209ENST00000638375 WRNIP1Q96S55 665 aa23.11■■□□□ 1.29
HLA-A-209ENST00000638375 CTNNA3Q9UI47 895 aa23.11■■□□□ 1.29
HLA-A-209ENST00000638375 RBM8AQ9Y5S9 174 aaKnown RBP23.11■■□□□ 1.29
HLA-A-209ENST00000638375 TACC3Q9Y6A5 838 aa23.11■■□□□ 1.29
HLA-A-209ENST00000638375 U3KPZ7 1027 aaPredicted RBP23.11■■□□□ 1.29
HLA-A-209ENST00000638375 INPP5BP32019 993 aa23.1■■□□□ 1.29
HLA-A-209ENST00000638375 CDK8P49336 464 aa23.1■■□□□ 1.29
HLA-A-209ENST00000638375 LDLRAD1Q5T700 205 aa23.1■■□□□ 1.29
HLA-A-209ENST00000638375 TATDN1Q6P1N9 297 aa23.1■■□□□ 1.29
HLA-A-209ENST00000638375 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.1■■□□□ 1.29
HLA-A-209ENST00000638375 SWAP70Q9UH65 585 aa23.1■■□□□ 1.29
HLA-A-209ENST00000638375 OTOFQ9HC10 1997 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 SAPCD2Q86UD0 394 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 TBC1D10CQ8IV04 446 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 TAOK2Q9UL54 1235 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 TLL2Q9Y6L7 1015 aa23.09■■□□□ 1.29
HLA-A-209ENST00000638375 ZNF213O14771 459 aa23.08■■□□□ 1.29
HLA-A-209ENST00000638375 REC8O95072 547 aa23.08■■□□□ 1.29
HLA-A-209ENST00000638375 HUNKP57058 714 aa23.08■■□□□ 1.29
HLA-A-209ENST00000638375 IMMTQ16891 758 aaKnown RBP23.08■■□□□ 1.29
HLA-A-209ENST00000638375 ZKSCAN4Q969J2 545 aaPredicted RBP23.08■■□□□ 1.29
HLA-A-209ENST00000638375 INCENPQ9NQS7 918 aa23.08■■□□□ 1.29
HLA-A-209ENST00000638375 CREBZFQ9NS37 354 aa23.08■■□□□ 1.29
HLA-A-209ENST00000638375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.08■■□□□ 1.29
HLA-A-209ENST00000638375 LAMA4Q16363 1823 aa23.08■■□□□ 1.28
HLA-A-209ENST00000638375 CYP21A2P08686 494 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 JAG1P78504 1218 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 VGLL4Q14135 290 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 NECTIN1Q15223 517 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 SHROOM1Q2M3G4 852 aaPredicted RBP23.07■■□□□ 1.28
HLA-A-209ENST00000638375 ANKRD13AQ8IZ07 590 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 CLMNQ96JQ2 1002 aa23.07■■□□□ 1.28
HLA-A-209ENST00000638375 PRDM1O75626 825 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 GDF11O95390 407 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 SEC24BO95487 1268 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
HLA-A-209ENST00000638375 FGRP09769 529 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 CAP2P40123 477 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 NOL9Q5SY16 702 aaKnown RBP23.06■■□□□ 1.28
HLA-A-209ENST00000638375 ABT1Q9ULW3 272 aaKnown RBP23.06■■□□□ 1.28
HLA-A-209ENST00000638375 SNCAIPQ9Y6H5 919 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 TAF6LQ9Y6J9 622 aa23.06■■□□□ 1.28
HLA-A-209ENST00000638375 CTNND1O60716 968 aaKnown RBP23.05■■□□□ 1.28
HLA-A-209ENST00000638375 RASA1P20936 1047 aa23.05■■□□□ 1.28
HLA-A-209ENST00000638375 PDE4BQ07343 736 aa23.05■■□□□ 1.28
HLA-A-209ENST00000638375 CERKLQ49MI3 558 aaPredicted RBP23.05■■□□□ 1.28
HLA-A-209ENST00000638375 STAG1Q8WVM7 1258 aa23.05■■□□□ 1.28
HLA-A-209ENST00000638375 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.05■■□□□ 1.28
HLA-A-209ENST00000638375 UNCXA6NJT0 531 aa23.04■■□□□ 1.28
HLA-A-209ENST00000638375 SLC27A2O14975 620 aa23.04■■□□□ 1.28
HLA-A-209ENST00000638375 HTRA3P83110 453 aa23.04■■□□□ 1.28
HLA-A-209ENST00000638375 AKNAD1Q5T1N1 836 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms