RNA–Protein interactions for RNA: ENST00000638264.1

TARDBP-229, Transcript of TAR DNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene TARDBP, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-229ENST00000638264 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
TARDBP-229ENST00000638264 LAMA4Q16363 1823 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 CDK5RAP2Q96SN8 1893 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 ST18O60284 1047 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 MCM2P49736 904 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 PLCD1P51178 756 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 CACNB3P54284 484 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 GABPAQ06546 454 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 RASA3Q14644 834 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 CCDC178Q5BJE1 867 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 PPP4R3BQ5MIZ7 849 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 DHX32Q7L7V1 743 aaKnown RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 TBC1D10CQ8IV04 446 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 CCDC17Q96LX7 622 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 TRIM34Q9BYJ4 488 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 DEFB129Q9H1M3 183 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 ALDH8A1Q9H2A2 487 aaPredicted RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 CNTNAP1P78357 1384 aa13.78□□□□□ -0.2
TARDBP-229ENST00000638264 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
TARDBP-229ENST00000638264 POTECB2RU33 542 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.21
TARDBP-229ENST00000638264 MCM5P33992 734 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 CTDSPL2Q05D32 466 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 ANKRD1Q15327 319 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 ZNF444Q8N0Y2 327 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-229ENST00000638264 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
TARDBP-229ENST00000638264 CSRNP1Q96S65 589 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 NBPF3Q9H094 633 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 GGA3Q9NZ52 723 aa13.77□□□□□ -0.21
TARDBP-229ENST00000638264 MYH1P12882 1939 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 LAMB1P07942 1786 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 DDTLA6NHG4 134 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-229ENST00000638264 CYP2D6P10635 497 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 RPS6KB1P23443 525 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 CDK8P49336 464 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
TARDBP-229ENST00000638264 ADCK5Q3MIX3 580 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 SH3BP5LQ7L8J4 393 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
TARDBP-229ENST00000638264 BAZ2AQ9UIF9 1905 aaKnown RBP13.76□□□□□ -0.21
TARDBP-229ENST00000638264 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
TARDBP-229ENST00000638264 NEK4P51957 841 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 C1QTNF8P60827 252 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 TATDN1Q6P1N9 297 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 IQCA1Q86XH1 822 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 ZFPM1Q8IX07 1006 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 MB21D2Q8IYB1 491 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-229ENST00000638264 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 SNX21Q969T3 373 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 GINM1Q9NU53 330 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 PDRG1Q9NUG6 133 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 TCP11L1Q9NUJ3 509 aa13.75□□□□□ -0.21
TARDBP-229ENST00000638264 ERICH2A1L162 156 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 EXOSC10Q01780 885 aaKnown RBP13.74□□□□□ -0.21
TARDBP-229ENST00000638264 LDHDQ86WU2 507 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 TEPSINQ96N21 525 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 TMEM39BQ9GZU3 492 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.74□□□□□ -0.21
TARDBP-229ENST00000638264 RRAGCQ9HB90 399 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
TARDBP-229ENST00000638264 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
TARDBP-229ENST00000638264 NEDD4P46934 1319 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 B4E1Z4 1266 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 RANBP6O60518 1105 aaKnown RBP13.73□□□□□ -0.21
TARDBP-229ENST00000638264 KDM4AO75164 1064 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 RASA1P20936 1047 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 NF2P35240 595 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 EAPPQ56P03 285 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-229ENST00000638264 KRT26Q7Z3Y9 468 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 CHMP4CQ96CF2 233 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 DYNLL2Q96FJ2 89 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 TTC14Q96N46 770 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
TARDBP-229ENST00000638264 PLIN4Q96Q06 1357 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 ASTN2O75129 1339 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-229ENST00000638264 PRC1O43663 620 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 TSPY3P0CV98 308 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 TSPY8P0CW00 308 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 LIFRP42702 1097 aa13.72□□□□□ -0.21
TARDBP-229ENST00000638264 FGD1P98174 961 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms