RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 HERC5Q9UII4 1024 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-259ENST00000638114 PDHXO00330 501 aa20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 TLR2O60603 784 aa20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 RRP1P56182 461 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 TMED8Q6PL24 325 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 SAP30BPQ9UHR5 308 aaKnown RBP20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 PALD1Q9ULE6 856 aa20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 AFG3L2Q9Y4W6 797 aa20.36■□□□□ 0.85
CACNA1A-259ENST00000638114 SIPA1L1O43166 1804 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 SMARCA5O60264 1052 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 USP5P45974 858 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 MOGSQ13724 837 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 TRIM34Q9BYJ4 488 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 BOLA2Q9H3K6 86 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 EFCC1Q9HA90 598 aa20.35■□□□□ 0.85
CACNA1A-259ENST00000638114 PHIPQ8WWQ0 1821 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 A0A0G2JLL6 359 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 SLC4A8Q2Y0W8 1093 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 SLC9C2Q5TAH2 1124 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 GADL1Q6ZQY3 521 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 PRRT2Q7Z6L0 340 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 CRACR2BQ8N4Y2 399 aaPredicted RBP20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 EDC3Q96F86 508 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 ATAD5Q96QE3 1844 aa20.34■□□□□ 0.85
CACNA1A-259ENST00000638114 HLA-DOAP06340 250 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 PDE6AP16499 860 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 ATP5JP18859 108 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 CAP2P40123 477 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 SOX10P56693 466 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 FASTKD5Q7L8L6 764 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 PAG1Q9NWQ8 432 aa20.33■□□□□ 0.85
CACNA1A-259ENST00000638114 PTPRFP10586 1907 aa20.33■□□□□ 0.84
CACNA1A-259ENST00000638114 MYH1P12882 1939 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 CAP1Q01518 475 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 RRP1BQ14684 758 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 ARHGEF6Q15052 776 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 GPAT2Q6NUI2 795 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 FOXP4Q8IVH2 680 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 PARK7Q99497 189 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 DCTPP1Q9H773 170 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 CPA4Q9UI42 421 aa20.32■□□□□ 0.84
CACNA1A-259ENST00000638114 ZNF532Q9HCE3 1301 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 MAGEB6P1A0A0J9YX57 407 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 KIF22Q14807 665 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 HAUS7Q99871 368 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 RIOK1Q9BRS2 568 aaKnown RBP20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 DNAJC18Q9H819 358 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
CACNA1A-259ENST00000638114 RGS19P49795 217 aa20.3■□□□□ 0.84
CACNA1A-259ENST00000638114 C17orf99Q6UX52 265 aa20.3■□□□□ 0.84
CACNA1A-259ENST00000638114 METTL16Q86W50 562 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-259ENST00000638114 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
CACNA1A-259ENST00000638114 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 USP17L5A8MUK1 530 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 ECM2O94769 699 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 CYP2C8P10632 490 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 MLLT1Q03111 559 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 SPP2Q13103 211 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 ZNF280CQ8ND82 737 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 CRNKL1Q9BZJ0 848 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 ZSWIM8A7E2V4 1837 aa20.29■□□□□ 0.84
CACNA1A-259ENST00000638114 TCRBV5S4A2TA0A5A2 114 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 GDF11O95390 407 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 ASNSP08243 561 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 ARHGAP39Q9C0H5 1083 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 AS3MTQ9HBK9 375 aa20.28■□□□□ 0.84
CACNA1A-259ENST00000638114 NAV1Q8NEY1 1877 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 ADD2P35612 726 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 TTC6Q86TZ1 520 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 GPATCH3Q96I76 525 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 ECHDC1Q9NTX5 307 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 AGTPBP1Q9UPW5 1226 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 SLC45A1Q9Y2W3 748 aa20.27■□□□□ 0.84
CACNA1A-259ENST00000638114 HTTP42858 3142 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 HMGCS2P54868 508 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 JAG1P78504 1218 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 SHROOM1Q2M3G4 852 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 SLFNL1Q499Z3 407 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 LCORLQ8N3X6 602 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 PROCA1Q8NCQ7 364 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 SERPINB13Q9UIV8 391 aa20.26■□□□□ 0.83
CACNA1A-259ENST00000638114 DDX60LQ5H9U9 1706 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 TREML2Q5T2D2 321 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 SMCR8Q8TEV9 937 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 EHD4Q9H223 541 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 GINM1Q9NU53 330 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 ZBTB21Q9ULJ3 1066 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 PTCH2Q9Y6C5 1203 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 LOC285556D6RIA3 1793 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 MYH7P12883 1935 aa20.25■□□□□ 0.83
CACNA1A-259ENST00000638114 BCRP11274 1271 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms